Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4518 ATGGTTATAGTTGCATTATCTTCTTCCCTTCCGGGGAGGTCCAACCTCTTCTCATCCTTACCTCCACCCAACAACCCTACCTCCTCCTCATCATCATCTGCCACTCCTCGTCCCCCTATTCCCATTCCCAAATACCCTCCCCCTAAAAAACCACCACCACCACCACCACCAAACCCAGCCTTCAAACACCACAACAAATCCAAATACTACAAACCCATTAAAAACCCCACAGTCATCACTTCCGAAGGCGACCGTTCCGTAATAATCGGTGAATCAGGCGTTTCCTATCTTCTCCCCGGCGCACCTTTCGAATTCCAGTTCAGTTACTCGGAGACACCGAAAGTGAAACCGTTAGCGATTCGTGAACCGGCGTTTTTACCTTTTGAACCGCCGACGATGCCGAGGCCTTGGACTGGTAAAGCTCCGTTGAAGAAGTCGAAGAAGAATATTCCGCTTTTTGATTCGTTTAATCCTCCGCCTCCTGATATGAAAGGTGTTAAGAAAGTTGAAATGCCGGGTCCTTTTCCTCTTGGGAAGTTTCCAGAAGAAGGAATGAGTAGAAAGGAGATACTTGGTGAGCCTCTTAAGAAATGGGAGGTCAAAATGCTTGTTAAGCCTATGATGTCTGATAATCGCCAGGTTAATCTCGGAAGGGACGGATTAACGCATAACATGTTGGAGTTGATACATTCACATTGGAAGCGTCGCCGCGTTTGTAAAATTCGGTGTAAAGGTGTTCCCACTGTTGATATGGATAATGTTTGCCGCCATATTGAGGAGAAAGCAGGGGGGAAAATAATACATCGAGATGGTGGTGTAGTTTATCTTTTCCGTGGCAGAAATTACAACTACCGTACTCGTCCGCAGTATCCAGTGATGCTCTGGAAGCCAGCTGCTCCTGTTTATCCAAAACTTATACAAGATGCTCCAGAAGGATTAACAAAAGCTGAAGCAGATGAGTTACGGATGAAAGGGAAAAGATTGTTGCCCATATGTAAAATAGGCAAAAATGGAGTATACACATCACTTGTAAAGGATGTCAGAGATGCTTTTGAAGGGAGCCATTTGGTGAAGATTGACTGCAAGGGATTGGACCCTAGTGATTACAAGAAGTTAGGTGCCAAGCTTAAGGATTTGGTTCCTTGTGTGCTATTGTCTTTTGATGATGAAAAAGTACTGATTTGGAGGGGCAGAGACTGGAAATCAAAGTACCCACAAGCTCCAGTTTTTCCACCTGCTGCAGTTGGCATTACAAGGAATTTGGACAATACAGATAAGGTTGGCGATAATCAATCAAAGGATATAAGCAACATGGTCAAAACAAGCTCAAAAATGTTATCTTTGTGGAAGAGTGCAATTGAGGCAAACAAAGCTTTGTTGCTAGAAGAATTTAATCTTGGTCCTGATGCTCTCTTGGAGAAGGTAGAAGAATTTGAGGGTATTTCGCATGCCACAGAACACTCCTATCCAGCATTTACTTCTTCAAGTGACGGCGTAGAGGATGTTGATGATTATAATGGCAACAATGATGATGAAGATAATGATGATTACTACAATGACGATGGAGACGTCGACGAGTTTAATGATATAGTGGATACTTATGCTCAACCCGGAACGCTACCAGTTGATTTGCTTGTTAATAAGCTCAAATTTAGAAATAAGTACTAA 1668 0.4329 MVIVALSSSLPGRSNLFSSLPPPNNPTSSSSSSATPRPPIPIPKYPPPKKPPPPPPPNPAFKHHNKSKYYKPIKNPTVITSEGDRSVIIGESGVSYLLPGAPFEFQFSYSETPKVKPLAIREPAFLPFEPPTMPRPWTGKAPLKKSKKNIPLFDSFNPPPPDMKGVKKVEMPGPFPLGKFPEEGMSRKEILGEPLKKWEVKMLVKPMMSDNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEEKAGGKIIHRDGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADELRMKGKRLLPICKIGKNGVYTSLVKDVRDAFEGSHLVKIDCKGLDPSDYKKLGAKLKDLVPCVLLSFDDEKVLIWRGRDWKSKYPQAPVFPPAAVGITRNLDNTDKVGDNQSKDISNMVKTSSKMLSLWKSAIEANKALLLEEFNLGPDALLEKVEEFEGISHATEHSYPAFTSSSDGVEDVDDYNGNNDDEDNDDYYNDDGDVDEFNDIVDTYAQPGTLPVDLLVNKLKFRNKY* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4518 555 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 10 550 IPR044599 GO:0000373
Tpr4g4518 555 SUPERFAMILY YhbY-like 194 288 IPR035920 -
Tpr4g4518 555 Gene3D - 194 290 IPR035920 -
Tpr4g4518 555 MobiDBLite consensus disorder prediction 14 59 - -
Tpr4g4518 555 PANTHER CRS2-ASSOCIATED FACTOR 2, CHLOROPLASTIC 10 550 - -
Tpr4g4518 555 SMART CRS1_YhbY_2 313 396 IPR001890 GO:0003723
Tpr4g4518 555 SMART CRS1_YhbY_2 195 278 IPR001890 GO:0003723
Tpr4g4518 555 ProSiteProfiles CRM domain profile. 193 289 IPR001890 GO:0003723
Tpr4g4518 555 MobiDBLite consensus disorder prediction 14 35 - -
Tpr4g4518 555 ProSiteProfiles CRM domain profile. 311 407 IPR001890 GO:0003723
Tpr4g4518 555 SUPERFAMILY YhbY-like 313 404 IPR035920 -
Tpr4g4518 555 MobiDBLite consensus disorder prediction 36 59 - -
Tpr4g4518 555 Gene3D - 313 407 IPR035920 -
Tpr4g4518 555 Pfam CRS1 / YhbY (CRM) domain 313 396 IPR001890 GO:0003723
Tpr4g4518 555 Pfam CRS1 / YhbY (CRM) domain 197 278 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4518 Tpr-Chr4 53347709 53353453 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4518 - - gmx:100801953 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4518 4 53347709 53353453 Tpr4g4518 4 53347709 53353453 ECH