Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4446 ATGACGAAGAATAATGAAGGAAAATTGGTAGACAAGAGCAGGATTGTCCCTGTGGCAATTATATTTGTGGTGCTATGTGGGCTTTCTTTCTATATGGGTGTAATCTTTGGTTCCGAGAATGACAGATTTGTATCAATTATCAGCCAAAGATCCCTTGACCCCCCCAAGGAATCATCATCCCCCAAGGAATTATCATCCCCCAAGGATTTATCATCAATAAGTTCATTGCAGATTAAATACATCAGTTTTCCTGAATGCGCTATTGATTATCAAGATTACACTCCATGCACCGATCCAAGGAGATGGAAGAAGTATGGATCCTATCGTCTCAATTTGTTGGAACGCCATTGCCCTCCAGTTTTTGAGAGGAAAGAATGCTTAGTTCCTCCCCCGGATGGATACAAGCCTCCAATTAGATGGCCAAAGAGCAGAGATGAATGTTGGTACAGGAATGTTCCATATGACTGGATTAACAAGCAGAAGTCCAATCAACATTGGTTAAAAAAGGAAGGGGAGAAATTCTTCTTTCCCGGCGGGGGTACTATGTTCCCAAATGGTGTTGGTAAATACGTCGATTTAATGGAAGATCTTATCCCAGAAATGAAAGATGGCACTATTCGAACTGCCATTGATACTGGTTGTGGGGTTGCTAGTTGGGGTGGTGACTTGTTGGATCGCGGGATACTTACTGTGTCTCTTGCTCCAAGAGATAACCATCAAGCTCAGGTTCAATTTGCTTTGGAGCGTGGTATTCCTGCAATTCTTGGTGTCCTTGCTACACACAGGCTTCCATTTCCATCAAATTCCTTTGATATGGCTCATTGCTCCAGATGCCTCATTCCATGGACAGACTTCGGTGGAGTTTCTCTTCTTGAAATACACCGGATTCTTCGTCCTGGAGGATTTTGGGTTTTGTCTGGTCCACCAATCAACTACGAGCGCAGGTGGCGTGGATGGAACACAACTATCAAAGAGCAAAAATCAAATTACGAGAAATTGCAGGGCTTGCTGACTTCACTGTGCTTTAAATTGCATAATAAAAAGGGCGACATTGCCGTATGGCAGAAGTCTCCTGATAATGATTGCTATAATAAGCTGACTAAAGATACCTATCCGCCTAAATGTGACGACAGCCTCGACTCAGATTCAGCATGGTATACTCCGATTCGTACTTGTTTGGTGGTTCCGAATCCAAAATTTAAGAATTTAGGTTTGACATCAATTTCTAAGTGGCCTGAGCGGTTGCGTGTTGCACCTGAACGTATTTCAAAGGTTTATCATGGGAGTGATAGTACGTTCAAACGTGACGATGATAAGTGGAAGAAGCATGTTGTGCACTACAAGAAGTTGATCCCTGAGCTTGGGACTGACAAGATAAGAAATGTGATGGATATGAATACGGTATATGGAGGTTTTGCTGCGGCTTTGATTGATGATCCTGTATGGGTTATGAATGTGGTTTCATCTTATGGTGCCAATACGCTCCCTGTGATTTATGATCGAGGCCTCATTGGAACCTTCCATGATTGGTGTGAAGCATTTTCGACATATCCTCGGACATATGATCTCCTTCATCTTGCAGGACTCTTCACGGCAGAAAGCCACAGATGTGAAATGAAGTATGTGTTGTTGGAAATGGACCGAATTTTACGACCTGGTGGGTATGCTATCATACGCGAGTCTAGTTACTTTTTTGATGGCATTACAACCATTGCCAAGGGCATGCGATGGGAATGTCGTAAAGAAGATACCGACCAGGGCAGTGACATGGAAAAGATATTAATATGCAAGAAAAAGCTATGGTATTCATCCAATAAGGATTCAAGATGA 1830 0.4268 MTKNNEGKLVDKSRIVPVAIIFVVLCGLSFYMGVIFGSENDRFVSIISQRSLDPPKESSSPKELSSPKDLSSISSLQIKYISFPECAIDYQDYTPCTDPRRWKKYGSYRLNLLERHCPPVFERKECLVPPPDGYKPPIRWPKSRDECWYRNVPYDWINKQKSNQHWLKKEGEKFFFPGGGTMFPNGVGKYVDLMEDLIPEMKDGTIRTAIDTGCGVASWGGDLLDRGILTVSLAPRDNHQAQVQFALERGIPAILGVLATHRLPFPSNSFDMAHCSRCLIPWTDFGGVSLLEIHRILRPGGFWVLSGPPINYERRWRGWNTTIKEQKSNYEKLQGLLTSLCFKLHNKKGDIAVWQKSPDNDCYNKLTKDTYPPKCDDSLDSDSAWYTPIRTCLVVPNPKFKNLGLTSISKWPERLRVAPERISKVYHGSDSTFKRDDDKWKKHVVHYKKLIPELGTDKIRNVMDMNTVYGGFAAALIDDPVWVMNVVSSYGANTLPVIYDRGLIGTFHDWCEAFSTYPRTYDLLHLAGLFTAESHRCEMKYVLLEMDRILRPGGYAIIRESSYFFDGITTIAKGMRWECRKEDTDQGSDMEKILICKKKLWYSSNKDSR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4446 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 126 321 IPR029063 -
Tpr4g4446 609 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 92 598 IPR004159 GO:0008168
Tpr4g4446 609 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 10 607 IPR004159 GO:0008168
Tpr4g4446 609 PANTHER PMT16, PUTATIVE-RELATED 10 607 - -
Tpr4g4446 609 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 430 590 IPR029063 -
Tpr4g4446 609 Gene3D Vaccinia Virus protein VP39 188 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4446 Tpr-Chr4 52228504 52233943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4446 - - gmx:100820623 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4446 4 52228504 52233943 Tpr4g4446 4 52228504 52233943 ECH