Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4430 ATGGCTGTATTCAAGAGAAAACTTGCAATGAGTTCTGGTGGCCACACTAATCCATTAGTTTGGTTAGCAGCTATAATCTGCACAATTTTTGCTATAGCTGTGATTATTATTGGCATTATAGTGTTCATTGGTTACATAATGATTCATCCAAGAATACCTATAATCAGTGTCACTAGTGCTCATTTAGATCTTCTAAGAAATGATTATGCTGGTTTACTTCAAACTCAATTAAGCATTGTTGTGACTGCTATTAATGGAAATGCAAAAGCTCATGCACAATTTTCTGAGATAACATTTAGTCTTAGCTTTCAAGGTCAAGGAATTGCTGTGCTCGTTGCTGATTCGTTCGATGTGCCGAAAAATAGTACAAACAATCTTCGATATGTTGTTCAATCATCACCAATACCGTTAACGCCTGAACAAATGGATGAAGTTGATGCGGCGCGGAAAAGTAATGAGATTAGTTTTGATTTTAAGGGTGCTGCTAGGACTAGATGGAGGATAGGTCCTTTTGGTTCTGTTAAATATTCTTGTCATTTGAATTGTCACCTCAAGTTTCGTCCATCGAATGGAAGTTATATACCCTCCAAGTGTTCCTCCAAATCAAAATAA 612 0.366 MAVFKRKLAMSSGGHTNPLVWLAAIICTIFAIAVIIIGIIVFIGYIMIHPRIPIISVTSAHLDLLRNDYAGLLQTQLSIVVTAINGNAKAHAQFSEITFSLSFQGQGIAVLVADSFDVPKNSTNNLRYVVQSSPIPLTPEQMDEVDAARKSNEISFDFKGAARTRWRIGPFGSVKYSCHLNCHLKFRPSNGSYIPSKCSSKSK* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4430 203 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 203 - -
Tpr4g4430 203 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 11 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4430 Tpr-Chr4 51978807 51979700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4430 - - gmx:100797168 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4430 4 51978807 51979700 Tpr4g4430 4 51978807 51979700 ECH
Tpr2g1281 2 14998185 14999091 Tpr4g4430 4 51978807 51979700 PCT