Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4426 ATGGAGAACAACAATATAGAGAGTAATAGTAATAACAGAATGAATGAAGCAAAAGTTCACACTGTTGTTGAGCTTGGTGGGCTTGAAACAAAGAGCACAGAGAGTCTTCTTTGTGATGTTGATGATTTTGAAGAGAGTGAAAAACAACAACAGCAACAAAAACAATTACCTCTTAAAAATTCTCTATCTCCTAGACAAATGAAATCCCTAGTTGCTCTTTGTGATACTTTGTTACCTTCCATCATAGACAACAACGTTGTTGCTTCCTCTGATGAATATGTCAACAACTTCTACCGTACTTCTGCTTCCATGGCTGGCACACCTGAACGTGTTGCAAATTTGGTGAGTGAGAAACTGAATCACCCAAGTACGAAGTTATTTACATTGACATTATGGCTACTATCAACATGGTTTGGTACATTGATTCTGTGTGGTACAGCATGTCTCTCAAAAAAATCACCCTTCTTTCTTAGCTTTCCCGAGTTATCTTCAGAGAAACGCCAAAAAATAATGCAATCTTGGTCTGTTAGTTACTTTCGTCTCCATAAAATGTTATTCAGAACTATAAAGCTTCTCACACTCCTAGTGTTCTTTACTCAGCTAGATGAAGAAGAAAACAACCCATCATGGAAGGCAATTGGGTATAGTGGACCTGATCCAGAGTTCAAAGCGCGGCAGAAGAACAAAATTTTACACAAAACATCCATAGAAGGAGGAGAAGAAGATGATGAAGAGGTTTTAGGACCTCTTTACAAAGGTCTTGTCCATCTGAACTACCCGTGTGATATCATTTCGGATTCTCTAAGACGATTCGGATTCCATGTATCTGTGACTCCTCCGACAAATAATAAAGCTTCTACGATATCATCTCCTTCTCTAGTTATCCAATGTGATGCAGTAGTTGTTGGTTCTGGCTCAGGAGGTGGAGTGGTAGCAGGAGTTTTAGCAAAAAGTGGTTATAAAGTGTTGGTATTGGAGAAAGGACAGTATTTTGCTAGGAAGAATCTTTCCCTTCTTGAAGGACCATCCCTGGATCAAATGTACCTATCTAATGGTTTGATAGCAACAGATGATATGTCAGTACTAGTACTAGCAGGTTCCACAGTTGGTGGAGGGTCTGCAATAAATTGGTCAGCCAGTATCAAAACACCTAACCATGTATGCAAGGAGTGGTGCGATCGGCATGAGCTAGAACTGTTTGAAAGTAAATTATACAAAGAAGCAATGGATGCTGTGTGTGAGAAAATGGGAGTCCAATCTGATTTTGACGACGAAGGATTTAACAATGCAGTACTAAGAAAAGGGTGTCATGAAATGGGGTATCCTGTTAGTAACATTCCTAGGAATGCTCCACCAGATCACTACTGTGGCTGGTGTTTTATGGGATGTAAGGATGGAAAAAAGAAGGGTACATTAGAGACATGGCTTGTAGACATGGTGAAATCGGGTAATGGAGCAATTCTTCCTGGTTGTGAGGCTATACAAATTTTACATGGAGAAAAGAAAGGAAGAGGCGGAAAAATAGCAAAAGGAGTGGCTTTTGCAATTGACAACAAGGGAAAAAAAGAATTCTGTGTGGTGGAGTCTAAGGTCACAATTGTAGCCTGTGGCGCACTAAGTACTCCACCGTTACTCAAAAGAAGCGGGTTGAAAAATGAAAACATAGGAAGGAACTTGCATCTTCATCCGGTGACAATGGCTTGGGGATACTTCCCTGATGCACCTGAATTGTGGCCAGAGGAACATAAAAAAAGCTATGAAGGAGGGATTATGACAGCAATGTCTACAATTGCCGCCGACTTTAACAAATCTGGATATGGTGCGGTGATCCAAACACCTTCATTGCATCCAGGCTTATTCTCAATTCTAATGCCGTGGAATTCTGGAACGCAAATAAAAGATCGAATGCGCAAGTTTTCCAGGACAGCTCATGTATTTGCTTTGGCAAGGGATCAAGGATCAGGAACTGTGGTGGAGTCACCTAACCATATAAGTTATCAAATGAAAGATGTAGACAAAGATAACTTAAGCAAAGGAATTGAGAAGGTGCTTAGAATATTAGCAGCAGCCGGAGCCGAAGAAATTGGGACCCATAATAATAAGGGAAGGAGCTTAAAGGTTAACGAAGTGAGCTATCATGAATTTGAGAAATTTGTTAATGAAGAAAGCTCAATGTCATTTACTGACCTTTCGACACCAGTATGCTCCGCACACCAGATGGGAAGCTGTCGTATGGGTAATAACCCAAAGGAATCGGTTGTGAACCAAATGGGAGAAACATGGGAAGTTGAGGGTCTTTATCTTGCAGATTCAAGTGTTTTTCCCACAGCTTTGGGTGTGAATCCAATGGTCACAATTCAGGCAATTGCATATTGCACGGCACAACATGTTCTTGAAGTTCTCAAAAGGAAAAGATGA 2418 0.4057 MENNNIESNSNNRMNEAKVHTVVELGGLETKSTESLLCDVDDFEESEKQQQQQKQLPLKNSLSPRQMKSLVALCDTLLPSIIDNNVVASSDEYVNNFYRTSASMAGTPERVANLVSEKLNHPSTKLFTLTLWLLSTWFGTLILCGTACLSKKSPFFLSFPELSSEKRQKIMQSWSVSYFRLHKMLFRTIKLLTLLVFFTQLDEEENNPSWKAIGYSGPDPEFKARQKNKILHKTSIEGGEEDDEEVLGPLYKGLVHLNYPCDIISDSLRRFGFHVSVTPPTNNKASTISSPSLVIQCDAVVVGSGSGGGVVAGVLAKSGYKVLVLEKGQYFARKNLSLLEGPSLDQMYLSNGLIATDDMSVLVLAGSTVGGGSAINWSASIKTPNHVCKEWCDRHELELFESKLYKEAMDAVCEKMGVQSDFDDEGFNNAVLRKGCHEMGYPVSNIPRNAPPDHYCGWCFMGCKDGKKKGTLETWLVDMVKSGNGAILPGCEAIQILHGEKKGRGGKIAKGVAFAIDNKGKKEFCVVESKVTIVACGALSTPPLLKRSGLKNENIGRNLHLHPVTMAWGYFPDAPELWPEEHKKSYEGGIMTAMSTIAADFNKSGYGAVIQTPSLHPGLFSILMPWNSGTQIKDRMRKFSRTAHVFALARDQGSGTVVESPNHISYQMKDVDKDNLSKGIEKVLRILAAAGAEEIGTHNNKGRSLKVNEVSYHEFEKFVNEESSMSFTDLSTPVCSAHQMGSCRMGNNPKESVVNQMGETWEVEGLYLADSSVFPTALGVNPMVTIQAIAYCTAQHVLEVLKRKR* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4426 805 Gene3D - 726 804 IPR036188 -
Tpr4g4426 805 Pfam GMC oxidoreductase 298 564 IPR000172 GO:0016614|GO:0050660
Tpr4g4426 805 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 36 805 - -
Tpr4g4426 805 Pfam GMC oxidoreductase 663 792 IPR007867 GO:0016614
Tpr4g4426 805 PIRSF Lg_Ch_AO 47 805 IPR012400 GO:0046577
Tpr4g4426 805 SUPERFAMILY FAD/NAD(P)-binding domain 295 799 IPR036188 -
Tpr4g4426 805 Gene3D - 283 602 IPR036188 -
Tpr4g4426 805 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 36 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4426 Tpr-Chr4 51822251 51827309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4426 42 801 Acyl Lipid Metabolism Gene Families AT4G19380 57.556 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4426 K17756 - gmx:100778208 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4426 4 51822251 51827309 Tpr4g4426 4 51822251 51827309 ECH
Tpr2g1271 2 14825483 14835784 Tpr4g4426 4 51822251 51827309 PCT