Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4424 ATGAGATTGTTGAAGAATAAGAAAGGAAGAAAGAAGGAGGAAGATCTTAAATGGAATGGAAAACTATGTTATTTGCCAGCAAGCCAAGCATTTGGATTGAGTATTGCAACATTGGTTAGTCTATTTTTTGCACATATCATTGGGAATTATGTATTAGTAAAGGTTCTGTTTTTCATATCTTGGCTTAGCTTTGGAATTGTAGTGATTGCTGCAACAAGCATGAGTAGAAAGCAGCTTTATGGGAAAGGATGGTTGAATGGTGAATGCTACATAGTCAAAGGAGGAACTTATTCTGGCTCAGCTATATTGATCCTTGTTACAATTTGTACTCTAAATGGTTCGGCTTTCTCAAAATTAAAATCCAGCCAAGCACATCAAGATCAAAAAATACACACACAAAGTGGGTGA 408 0.3578 MRLLKNKKGRKKEEDLKWNGKLCYLPASQAFGLSIATLVSLFFAHIIGNYVLVKVLFFISWLSFGIVVIAATSMSRKQLYGKGWLNGECYIVKGGTYSGSAILILVTICTLNGSAFSKLKSSQAHQDQKIHTQSG* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4424 135 Pfam Protein of unknown function (DUF1218) 49 108 IPR009606 -
Tpr4g4424 135 PANTHER OS07G0462200 PROTEIN-RELATED 11 122 - -
Tpr4g4424 135 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 11 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4424 Tpr-Chr4 51807344 51808605 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4424 - - gmx:100500694 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4424 4 51807344 51808605 Tpr4g4424 4 51807344 51808605 ECH
Tpr2g1270 2 14819114 14821295 Tpr4g4424 4 51807344 51808605 PCT