Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4423 ATGGGATCCCAAGGCGGGTTCGGTCAATCAAAAGAATTTCTCGACTTAATCAAATCAATCGGAGAAGCTCGATCTAAAGCCGAAGAAGATCGAATCGTAATTCGTGAAATCGAAACCCTAAAACGACGAATTTCTGAACCAGATATCCCAAAACGAAAGATGAAAGAGTACATTATTCGTCTTCTTTATGTTGAAATGCTTGGTCATGACGCTTCTTTCGGTTACATTCACGCCGTTAAAATGACACACGATGATAATCTTCTCTCAAAACGCACCGGTTATCTCGCCGTTACTCTTTTCCTTAACGACGATCATGATCTTATTATTCTCATTGTTAATACTATTCAGAAAGATCTTAAGTCTGATAATTATCTTGTTGTTTGTGCTGCACTCAATGCCGTTTGTAGACTTATCAATGAGGAAACTATACCTGCAGTTTTGCCTCTTATTGTTGAACTACTTTCTCATGGTAAAGAAGCTGTTAGGAAGAAAGCGGTTATGGCACTTCATAGCTTTTACCGTAAATCACCTTCTTCTGTTTCCCATCTTGTGTCGAATTTTAGGAAAAGATTGTGTGATAATGATCCTGGTGTTATGGGTGCTACTCTTTGTCCTTTGTTTGATCTTATAAACGATGATCCAAATCCGTATAAGGATCTTGTTGTTAGTTTTGTTAGTATTCTTAAACAGGTAGCTGAACATAGGTTGCCTAAGAGCTATGATTATCATCAGATGCCTGCTCCATTCGTTCAGATTAAGTTGCTGAAAATTCTTGCGTTGTTGGGGAGTGGTGACAAGCCTTCTAGCGAACACATGTATACTGTTATTGGCGATATAATTAGGAAGGGAGATTCGTCGAGTAACATAGGGAATGCTATTCTTTATGAGAGTATTCGCACTGTCTCTTCCATACATTCCAATGCCAAGTTGTTAGAAGCTGCTGCGGATGTGATTGCCAAGTTTTTGAAGAGTGATAGTCATAATTTGAAGTACATGGGCATTGATGCTCTTGGTCGGCTGATAAAGTTAAGTCCGCTTATTGCAGAACAACATCAACTTGCTGTCATTGACTGCTTAGAGGATCCTGATGATACTCTAAAGCGAAAAACTTTTGAACTGCTATACAAAATGACCAAGTCTTCCAATGTGGAAGTGATTGTTGACCGTATGATTGAGTACATGATCAGCATTAGTGACGATCATTATAAAACATATATAGCTTCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACAATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTGAATATTAAAGTTGCACATAATTTAATGCGGTTGATTGCGGAAGGATTTGGAGAGGATGATGATGCGGCATATAGTCAGCTGAGATCGTCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCAAAGCTTCCATCAGTTTTTCTTCAAGTTATCTGTTGGGTTCTTGGGGAATATGGCACGGCTGATGGAAAGCATTCCGCTTCCTATATCACTGGGAAATTATGCGATATGGCAGAGGCATATTCTAATGATGAAATTGTTAAGGCATATGCGATAACAGCATTGACAAAAATTTATGCATTTGAAATAGCAGCTGGGAGGAAAGTGGATATGCTATCTGAGTGCCAATCTTTGGTTGAAGAATTATTAGCATCCCACTCCACTGATTTGCAGCAACGTGCTTATGAATTGCAAGCTGTTATTGGTCTGGATGCACGAGCTGTTGAAGCAATATTGCCGCATGATGCCAGTTGCGAAGACATTGAGGTGGATAAGAATCTGTCTTTCCTCAATGGTTATATCCAGCAGTCTATAGAAAGTGGTGCTATGCCCTACATTTCAGAGAATGAGCGCTCTGGAATGGTGAATACGAGCAACTTCAGAAGCCATGACCAGCAAGAATCTGGACAGCATGGTCTGAGATTTGAGGCGTATGAAGTTCCAAAGGCTCCTGTGCCGTCCAAAGTTACTCCAGTTTCACTTTCATCCACAACCGACCTTGTTCCAGTACCCGAATCATTGTATGCTAGGGAGACTCAACAGATCTCGTCAGTGGGATTAGCATCAGATACAGGATCATCGGAGCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAAGCCAACTTATTCGTCCCCAGCATCATCTTCAAATTCTACTTCCCAAAATCCAGTGAATGGCGTGACGAAGGTAGATGTTGCAACTACTATAAATTCAAAAGCACGTGATAGCTATGATTCAAGAAAGCAACAAAATGAAATTGATCCAGAAAAGCAGAAGCTTGCCGCTTCACTGTTTGGTGGTTCAACTAAAACTGAGAGAAGAACATCAACTAGCAGCAAGGGTCCAAAAGCTAGTGCTGCAGACAGACCTCAGGATTCAAAAGCAGCAAGTGTACCTAATAAAGCATCTGGGGAGAAAACTAATCAAGTTCAACAACCTCCTCCTCAAGATTTGCTTGACTTGGGTGAACCAACTGTCACTGCTGCACCTCCCGCTGTGGATCCATTCATGCAACTGGAAGGACTTCTTGACTCAAGCAATAGTTCTGCAGTAACTAACAGTGGTGGTGCTGTTGCAAATGCACCTGATATTATGGGACTCTATAGAGGGACTACTTCTAGCGAACAGAGTGGAGGTGGTGGCTATAACCCTGCAAGTGGGGATAATTTAAATCTTTTATCTGAATTGTCAAATGCAGCAGCTGTCAGAGGCACCACTGGAGCAACAATTGTGTCGCCCTTATCACCATCTGTAAAGGGTGCTAATGCTAAAGATTCTTTGGAGAAGGATGCAAAAGTCAGGCAGATGGGTGTGACGCCCACGAGCCAGAATCCCAACTTATTCAGGGACTTGCTTGGCTAA 2910 0.4148 MGSQGGFGQSKEFLDLIKSIGEARSKAEEDRIVIREIETLKRRISEPDIPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDNLLSKRTGYLAVTLFLNDDHDLIILIVNTIQKDLKSDNYLVVCAALNAVCRLINEETIPAVLPLIVELLSHGKEAVRKKAVMALHSFYRKSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLFDLINDDPNPYKDLVVSFVSILKQVAEHRLPKSYDYHQMPAPFVQIKLLKILALLGSGDKPSSEHMYTVIGDIIRKGDSSSNIGNAILYESIRTVSSIHSNAKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPLIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIEYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNIKVAHNLMRLIAEGFGEDDDAAYSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKHSASYITGKLCDMAEAYSNDEIVKAYAITALTKIYAFEIAAGRKVDMLSECQSLVEELLASHSTDLQQRAYELQAVIGLDARAVEAILPHDASCEDIEVDKNLSFLNGYIQQSIESGAMPYISENERSGMVNTSNFRSHDQQESGQHGLRFEAYEVPKAPVPSKVTPVSLSSTTDLVPVPESLYARETQQISSVGLASDTGSSELKLRLDGVQKKWGKPTYSSPASSSNSTSQNPVNGVTKVDVATTINSKARDSYDSRKQQNEIDPEKQKLAASLFGGSTKTERRTSTSSKGPKASAADRPQDSKAASVPNKASGEKTNQVQQPPPQDLLDLGEPTVTAAPPAVDPFMQLEGLLDSSNSSAVTNSGGAVANAPDIMGLYRGTTSSEQSGGGGYNPASGDNLNLLSELSNAAAVRGTTGATIVSPLSPSVKGANAKDSLEKDAKVRQMGVTPTSQNPNLFRDLLG* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4423 969 MobiDBLite consensus disorder prediction 930 969 - -
Tpr4g4423 969 MobiDBLite consensus disorder prediction 723 756 - -
Tpr4g4423 969 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 4 965 - -
Tpr4g4423 969 MobiDBLite consensus disorder prediction 757 771 - -
Tpr4g4423 969 SUPERFAMILY ARM repeat 10 581 IPR016024 -
Tpr4g4423 969 MobiDBLite consensus disorder prediction 812 831 - -
Tpr4g4423 969 MobiDBLite consensus disorder prediction 952 969 - -
Tpr4g4423 969 PIRSF AP4_epsilon 922 969 IPR017109 GO:0015031|GO:0030124
Tpr4g4423 969 PIRSF AP4_epsilon 633 830 IPR017109 GO:0015031|GO:0030124
Tpr4g4423 969 PIRSF AP4_epsilon 1 701 IPR017109 GO:0015031|GO:0030124
Tpr4g4423 969 Gene3D - 3 594 IPR011989 -
Tpr4g4423 969 Pfam Adaptin N terminal region 42 581 IPR002553 GO:0006886|GO:0016192|GO:0030117
Tpr4g4423 969 MobiDBLite consensus disorder prediction 780 800 - -
Tpr4g4423 969 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 4 965 - -
Tpr4g4423 969 MobiDBLite consensus disorder prediction 720 831 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4423 K12400 - gmx:100806914 1539.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4423 4 51704384 51716021 Tpr4g4423 4 51704384 51716021 ECH