Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4421 ATGGGTTGGAGAAATGGTTGTGAAGAATTGACTCAATCGAAACCACTATTCCTTACGATCTACAGTGTCGTAATAATTGGAATCGTGGTTTCATCTTTCTACGTTTTTTCTGCTATTTATTCCAGTAACACTCCTGCTGCTCATTCTTCTGCATGGCTTTCTTCCTCCATCTCTCCTGAGGATCCCCACCATATAGAACAAGCACTCAACATTTCTCAGTCAGAAAAGGTGCAAAATGTGTCCACCACTCCTTCACCAGGGAAACAGAATGTGTGGCCAACTTCTGTTTGGGACATTCCACCCTCCAATAAAAGAATGCCGCCCTTGAAGGATTTCCGACTTACCAAACAACTGGTTCAGCAAAGGGTGAAAGATAACGTTGTAATAGTGACCTTTGGTAACTATGCATTCATGGATTTTATTCTGACTTGGGTCAAGAAATTGACTGATCTCGAAGTTTCTAATTTTCTTGTTGGTGCAATGGATACCAAATTAGTGGAGGCACTGTATTGGAAAGGAGTACCAGTTTTTGACATGGGCAGCCATATGAGCACTGTAGATGTTGGCTGGGGTTCTCCAACATTTCACAAAATGGGGAGAGAGAAAGTTATTTTGTTAGACTCGATTCTGCCTTTTGGTTTTGAAGTATTGATGTGTGATACAGACATGGTTTGGTTAAAGAACCCACTTCCATATCTTGCTCGTTATCCAGGAGCAGATATTTTAACTTCAAGTGATCAAGTTATACCAACAGTTGTTGATGACAGATTGGAAATTTGGCAAGAAGTTAGTGGTGCCTACAACATTGGAATTTTCCATTGGAGACCTACAGAGTCTGCCAAGAATTTGGTTAAGAAATGGAAAGAAATGCTTCTAGCTGATGACAAGATATGGGATCAGAGTGGGTTTAATGATATTCTTCACAATCAGCTAGGACCATCTGTTGATGATGACAGCGGATTTGTTTTTGCTTTTGATGGAAAACTGAAGCTGGGAATTTTGCCTGCTAGTATCTTCTGTAGTGGACATACATATTTTGTCCAGGCTATGTACCAGCAACTAAGGTTGGAGCCATATGCAGTACACACGACATTTCAATATGGAGGCACCGAAGGAAAGCGCCACCGACTACGAGAAGCCATGTTCTTCCTTGATCCACCAGAATACTATAATCCTCCTGGGGGTCTCTTATCATTTAAGCCATCTATTCCAAAAAGCTTGTTGCTAAGCGGGGAGCACAATGTTGACTCACATTTTACTCTTATAAATCACCAAATGAAACAGATTAGGACAGCACTTGCAATTGCTTCCCTTCTGAACAGAACACTGGTTATGCCTCCTCTATGGTGCAGGCTTGATAGGCTATGGTTTCCCCATCCTGGTATTTTGGAGGGATCTATGACTAGACAACCTTTTCTCTGTCCTTTGGACCATGTATTTGAGGTAAATATCATGTTGAAAAAACTCCCAGAAGAAGAGTTTGGCCCTGAAATAGGTATTAGAGAGTATTCAATGCTTGATAATCCCTCTCTGCCGCCAGAGGTGAAAAATTCATGGCTTGATGTTCAGCTCTGTAAAGAAGGAACTCAAGATTGCGATGGATCATATAATACCACTGTTGGAGGAGTACTTAAATTTCCAAAGCATAGCAATGAAGAGATGTTTATGAAAGTATTCTCACTATTCAACGATGTAAAAGTCATTAAGTTATCTTCCGTGCAAGATGCATTCACTGGTTTCACTAATAAGGAAAGGGAAGATAGATTCAGAAATCGCGTCAAGCGGTATGTTGGCATATGGTGCTGTATGCCAGATATACCTATTGGCCACATATATTATGATATGTATTGGGATGAAAAACCTGAATGGAAACCAATTCCTCCTCAATCTCCCGAGGATGATCATCCACCTTTCTGA 1917 0.4079 MGWRNGCEELTQSKPLFLTIYSVVIIGIVVSSFYVFSAIYSSNTPAAHSSAWLSSSISPEDPHHIEQALNISQSEKVQNVSTTPSPGKQNVWPTSVWDIPPSNKRMPPLKDFRLTKQLVQQRVKDNVVIVTFGNYAFMDFILTWVKKLTDLEVSNFLVGAMDTKLVEALYWKGVPVFDMGSHMSTVDVGWGSPTFHKMGREKVILLDSILPFGFEVLMCDTDMVWLKNPLPYLARYPGADILTSSDQVIPTVVDDRLEIWQEVSGAYNIGIFHWRPTESAKNLVKKWKEMLLADDKIWDQSGFNDILHNQLGPSVDDDSGFVFAFDGKLKLGILPASIFCSGHTYFVQAMYQQLRLEPYAVHTTFQYGGTEGKRHRLREAMFFLDPPEYYNPPGGLLSFKPSIPKSLLLSGEHNVDSHFTLINHQMKQIRTALAIASLLNRTLVMPPLWCRLDRLWFPHPGILEGSMTRQPFLCPLDHVFEVNIMLKKLPEEEFGPEIGIREYSMLDNPSLPPEVKNSWLDVQLCKEGTQDCDGSYNTTVGGVLKFPKHSNEEMFMKVFSLFNDVKVIKLSSVQDAFTGFTNKEREDRFRNRVKRYVGIWCCMPDIPIGHIYYDMYWDEKPEWKPIPPQSPEDDHPPF* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4421 638 Pfam Nucleotide-diphospho-sugar transferase 153 377 IPR005069 -
Tpr4g4421 638 PANTHER ARABINOSYLTRANSFERASE XEG113 1 638 - -
Tpr4g4421 638 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 1 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4421 Tpr-Chr4 51646486 51653456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4421 K20784 - gmx:100819032 1115.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4421 4 51646486 51653456 Tpr4g4421 4 51646486 51653456 ECH
Tpr2g1268 2 14766110 14773023 Tpr4g4421 4 51646486 51653456 PCT