Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4410 ATGGAAACGTCACCGGAGGATTTCCGACGAAGTTCCGGCGAACCGGAGGAGAAAGTGTTCGTTGGAAGTAATAAATTCGCTGATTCTTCATCCAATAGTTTCAACACTTTTCTTTATCTCTCATTATGGCTTGGAGCTATTCATTTCAATGGAGCAGTTATTTTCTTTGCACTTTTCTTCCTTCCTTTCTCCAAAGCACTTTTGGTTTTTGGTTTGCTTTTTGTGTTAATGGTGATTCCTATTGATGAAAAGAGCTTATACGGTCGCAAATTAGCCAGGTATATATGTAAGCATGCTTGTAGTTACTTTCCTGTCACGCTTCATGTAGAGGATATAAAGGCTTTCCATCCAAATCGTGCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGAGTTGTAGCACTAGCCGACAGCACAGGTTTTATGCCTCTTCCGAAAATAAAAGTTCTTGCGAGCAGTGCTATATTTTACACACCATTTCTGAGACATATATGGACATGGTTGGGTCTGACACCAGCAACAAGGAAAAACTTTACCTCCTTGCTGGATGCAGGCTACAGTTGCATCTTAGTACCAGGTGGAGTTCAAGAAACATTTTTCATGGAGCACGGTAGTGAGATTGCCTTTCTCAAGACAAGAAGAGGATTTGTCCGTATAGCAATGGAGAAGGGGAAACCACTGGTTCCAGTTTTCTGCTTTGGACAGTCAGATGTCTATAAGTGGTGGAAACCAGGTGGGAAGCTGATTCTGAATGTCGCGAGGGCTATCAAGTTCACCCCGATATATTTTTGGGGACTTTTCGGGTCTCCAATACCATTCAAACATCCCATGTATGTGGTGGTGGGTAGACCAATTGAGCTTGAGAAAAATCCGAAACCGACACCTGAGGAGGTTGCTAAAGTACATAGTCAGTTTGTTGAAGCACTTCAAGATCTCTTTGAACGAAACAAAGCTCGAGTTGGATATCCGGACCTTCAGTTGAAAGTTGTTTGA 1002 0.4202 METSPEDFRRSSGEPEEKVFVGSNKFADSSSNSFNTFLYLSLWLGAIHFNGAVIFFALFFLPFSKALLVFGLLFVLMVIPIDEKSLYGRKLARYICKHACSYFPVTLHVEDIKAFHPNRAYVFGYEPHSVLPIGVVALADSTGFMPLPKIKVLASSAIFYTPFLRHIWTWLGLTPATRKNFTSLLDAGYSCILVPGGVQETFFMEHGSEIAFLKTRRGFVRIAMEKGKPLVPVFCFGQSDVYKWWKPGGKLILNVARAIKFTPIYFWGLFGSPIPFKHPMYVVVGRPIELEKNPKPTPEEVAKVHSQFVEALQDLFERNKARVGYPDLQLKVV* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4410 333 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 149 317 - -
Tpr4g4410 333 CDD LPLAT_MGAT-like 102 321 - -
Tpr4g4410 333 PANTHER TYPE 2 ACYL-COA DIACYLGLYCEROL ACYLTRANSFERASE 6 333 - -
Tpr4g4410 333 Pfam Diacylglycerol acyltransferase 58 330 IPR007130 GO:0008374
Tpr4g4410 333 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 6 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4410 Tpr-Chr4 51489069 51494478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4410 22 333 Acyl Lipid Metabolism Gene Families AT3G51520 70.288 1.59e-166 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4410 K22848 - gmx:100809628 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4410 4 51489069 51494478 Tpr4g4410 4 51489069 51494478 ECH
Tpr2g1238 2 14503231 14507982 Tpr4g4410 4 51489069 51494478 PCT