Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4409 ATGGGGTTTGTGCAGCTCTTGTATGTAGCTTCTTTGCCAGTAATAAAAGTATTATTGATTACAGCACTTGGTTTGTTTCTTGCAATTGATCAAATAGATGTATTGGGAGCAGATGCAAGGAACAAAGTGAATAATCTTGTATTTTATGTGTTTAATCCGTCGATGGTTGGTAGCAATTTGGCAGAAACATTAACATCTGAGAATGTTCTTAGTTTGTGGTTCATGCCAGTTAATATTCTTGCCACATTCATATTAGGCTCAGCTTTAGCATGGATTGTGATAAAGATCACAAGGCCTCCAAAGCACTTGGAAGGTTTAATATTAGGTTGCTGTTCTGCAGGAAATTTAGGAAATTTGCCTATAATCATTATTCCAGCTATATGTAAAGAGAAAGGAAGTCCTTTTGGTGACCCTAAAACCTGCCATAAATATGGGATGGCTTATGTTTCACTTTCTATGGCGATTGGTGCAGTTCTGCTATGGACATATGTTTACAACATTATGAGGATTTCATCAAGTAGAGCCATGATGACTTCAGGGGTGATATCAGAATCACAACAAAACAATATTGCAGTTGTAAAAGATACCCCAAATGATGCTTACACCTTACTACTTCCAAATACAGAATATGAGGAAAAGGTTTGGTTCTCAGATAAAATTAAGCGCAGTTTGTGGAAGATTTCAAGAAACCTCAATTTCAAAACCATTTTTGCACCATCAACCATTGGAGCAATTATTGGGTTTTGCATTGGTGTAATAAATCCAATACGTAAGTTAATGGTTGGGAATGATGCTCCATTACATGTGGTTGAAGACTCTGCATCCATGTTGGGGGAAGCAGCCATACCTACTGTCACCCTCATATTGGGTGCAAATCTTCTAAAAGGTTTGAAGGGTACAAGTACTCCAGTGTGGTCAATTGTGGGGATCATAGCTGTAAGATACATTTTCCTGCCAATATTAGGTGTTATAGTGGTCCAAGGAGCAATCAAATTAGGTTTGGTGCAAGCAGATCCTTTATATCAGTTTGTCCTTCTACTTCAGTATGCACTTCCACCAGCTATGAATATAGGAACTATGGCTCAGTTGTTTGGATCTGGTGAAAGTGAATGTTCTGTTATAATGCTATGGTCATATGCCATGGCTTCAATTGCAGTTACACTTTGGTCGACCTTATTTATGTGGCTAGTTATTTGA 1197 0.3793 MGFVQLLYVASLPVIKVLLITALGLFLAIDQIDVLGADARNKVNNLVFYVFNPSMVGSNLAETLTSENVLSLWFMPVNILATFILGSALAWIVIKITRPPKHLEGLILGCCSAGNLGNLPIIIIPAICKEKGSPFGDPKTCHKYGMAYVSLSMAIGAVLLWTYVYNIMRISSSRAMMTSGVISESQQNNIAVVKDTPNDAYTLLLPNTEYEEKVWFSDKIKRSLWKISRNLNFKTIFAPSTIGAIIGFCIGVINPIRKLMVGNDAPLHVVEDSASMLGEAAIPTVTLILGANLLKGLKGTSTPVWSIVGIIAVRYIFLPILGVIVVQGAIKLGLVQADPLYQFVLLLQYALPPAMNIGTMAQLFGSGESECSVIMLWSYAMASIAVTLWSTLFMWLVI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4409 398 PANTHER AUXIN EFFLUX CARRIER FAMILY PROTEIN 1 397 - -
Tpr4g4409 398 Pfam Membrane transport protein 12 389 IPR004776 GO:0016021|GO:0055085
Tpr4g4409 398 PANTHER - 1 397 IPR045033 GO:0080162
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4409 Tpr-Chr4 51484024 51489026 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4409 K24139 - gmx:100810166 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4409 4 51484024 51489026 Tpr4g4409 4 51484024 51489026 ECH
Tpr2g1237 2 14498977 14502814 Tpr4g4409 4 51484024 51489026 PCT