Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4407 ATGAGAATTTTCTTCTCAAACAAATTCTTTACCAAAGCCCGCAGCTTCATAGGCATAGGACTCGCTTCCGCCGCCACATTTGCCGCCACATCTTCCTCCTCCGCCGCCACTTCCACCTCTTCTTCCGACGACACTGATTCTTCATACTATTCTTCTTCTTCCGACCAAACAAACGGCCGCAAGGTGCTCAAAACGAAGCTATGCATAATCGGAAGCGGTCCAGCGGCTCACACAGCCGCCATTTACGCTTCTCGAGCCGAGCTCAAGCCGATCCTATTCGAAGGTTGGATGGCCAACGACATTGCTCCAGGCGGTCAGCTCACCACTACAACCGACGTCGAGAATTTCCCGGGATTTCCGGATGGCATCCTCGGTGCAGATCTCATGGACAACTGCCGTAAACAATCGCAGCGTTTCGGCGCCGAAATCATCACCGAAACAGTTACAGAGGTTGATTTCTCAAAACGGCCGTTAAAAGTTATAACTGATTCTACCACCGTTGAGGCAGAATCCGTCGTGATCGCCACTGGAGCCGTAGCGAAAAAGTTAGTTTTCGACGGCTCTAGTGACCGTCCTGGCGGATTCTGGAACCACGGAATATCGGCATGTGCGGTATGTGACGGTGCAGCACCGATATTCCGAAACAAACCCTTAGTGGTTGTCGGCGGCGGTGACACGGCAATGGAGGAAGCTACATTCCTTAGCAAATTTGGTTCAAAAGTGTATATAATTCATAGGAGGGATGAATTTAGGGCTAGTAAATCGATGCAAAGTAAGGTAATGAAGAATCCAAAGGTTGAGGTGTTGTGGAATTCAGTTGTGGTTGGAGCATTTGGTGATGAAAAGGGAAGGGTTCTAGGGGGAGTTAAGGTGAAGAATTTGGTGAATGGTGAAGTGTTTGACTTGAAAGTTTCTGGTTTGTTTTTTGCAATTGGACATGAACCTGCTACTAAGTTTTTGGATGGACAAGTTGAATTGGATTATGATGGTTACATTGTGACAAAGGCAGGTACTACAAAGACTAGTGTTGAAGGAGTTTTTGCTGCTGGTGATGTTCAGGATAAGAAGTATAGACAAGCTATTACTGCTGCTGGAACTGGGTGTATGGCAGCCTTGGATGCAGAACATTACTTGCAACGGATTGGTCTAAAGGAGGAGAGTAAGAATGATCGACTCACCAGGTTATTGTACTCGGAGTTCAGAAGATAA 1209 0.4706 MRIFFSNKFFTKARSFIGIGLASAATFAATSSSSAATSTSSSDDTDSSYYSSSSDQTNGRKVLKTKLCIIGSGPAAHTAAIYASRAELKPILFEGWMANDIAPGGQLTTTTDVENFPGFPDGILGADLMDNCRKQSQRFGAEIITETVTEVDFSKRPLKVITDSTTVEAESVVIATGAVAKKLVFDGSSDRPGGFWNHGISACAVCDGAAPIFRNKPLVVVGGGDTAMEEATFLSKFGSKVYIIHRRDEFRASKSMQSKVMKNPKVEVLWNSVVVGAFGDEKGRVLGGVKVKNLVNGEVFDLKVSGLFFAIGHEPATKFLDGQVELDYDGYIVTKAGTTKTSVEGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQRIGLKEESKNDRLTRLLYSEFRR* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4407 402 Pfam Pyridine nucleotide-disulphide oxidoreductase 66 366 IPR023753 GO:0016491
Tpr4g4407 402 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 64 387 - -
Tpr4g4407 402 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 203 225 IPR008255 GO:0016491
Tpr4g4407 402 Gene3D - 185 316 IPR036188 -
Tpr4g4407 402 TIGRFAM TRX_reduct: thioredoxin-disulfide reductase 66 378 IPR005982 GO:0004791|GO:0005737|GO:0019430
Tpr4g4407 402 SUPERFAMILY FAD/NAD(P)-binding domain 63 378 IPR036188 -
Tpr4g4407 402 Gene3D - 69 377 IPR036188 -
Tpr4g4407 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 67 86 - -
Tpr4g4407 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 169 187 - -
Tpr4g4407 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 217 235 - -
Tpr4g4407 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 304 320 - -
Tpr4g4407 402 PRINTS FAD-dependent pyridine nucleotide reductase signature 331 353 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 66 88 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 104 119 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 125 135 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 170 178 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 196 208 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 213 237 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 265 281 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 306 327 - -
Tpr4g4407 402 PRINTS Pyridine nucleotide disulphide reductase class-II signature 341 359 - -
Tpr4g4407 402 PANTHER THIOREDOXIN REDUCTASE 64 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4407 Tpr-Chr4 51454368 51457464 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4407 K00384 - gmx:100794363 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1234 2 14458121 14463584 Tpr4g4407 4 51454368 51457464 PCT