Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4383 ATGATGGAAGGAGACATAGCAATTGAAGAACATCAAAGATCTTTAGCAGCTCCTTTCGTATTTCTCATCGTTCTCGCTTTTCAGTTTGCTTCTCATTGGATTGATCATCTCAAGAAGAGTGGATCTGAGAAGGAAAAAGAAATTAAGTTGCGTGCAGAAATAAAAGAACTTTTGAAGGAGGCAAGCTCCCTGTCACAGCCATCCACCTTTGCACAAGGAGCAAAACTCAAAAGACAGGCAGCTGCAAAGGAGAAGGAACTTGCAAAGTGTCAAGATTTACAGGATAAGGACACAACTTTGTATTCAAATGTTCTGCTCTTCTCAAAGGTTTTAACATATTTAATTTTGCTTATCTGGTTTTGGAGTTCTCCTGTAGCTAGCATATCTCAACAACTCGTGCAACCATTTGGGAGATTATTATCTTGGAGGACTGGTGGAGTTCAAAATAACAATATTATGGTTGGCATAATACCTTGGCTAGCAGTATCTTCGAGGGTTAGCAGATTTATTTGTAAATTCAAGTATAGCAAATAG 534 0.3839 MMEGDIAIEEHQRSLAAPFVFLIVLAFQFASHWIDHLKKSGSEKEKEIKLRAEIKELLKEASSLSQPSTFAQGAKLKRQAAAKEKELAKCQDLQDKDTTLYSNVLLFSKVLTYLILLIWFWSSPVASISQQLVQPFGRLLSWRTGGVQNNNIMVGIIPWLAVSSRVSRFICKFKYSK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4383 177 Coils Coil 76 96 - -
Tpr4g4383 177 Pfam CHD5-like protein 38 162 IPR028945 GO:0071816
Tpr4g4383 177 PANTHER BNAC07G33680D PROTEIN 14 166 - -
Tpr4g4383 177 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 14 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4383 Tpr-Chr4 51110081 51117640 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4383 K22384 - gmx:100815853 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4383 4 51110081 51117640 Tpr4g4383 4 51110081 51117640 ECH