Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4371 ATGAACTACATCTTCAAGATCATGCATTGGACTCGATCTCTAACTCATTTCAGATCAACAAACATATACTCAAGCAAATTTTCAAACTTTTCTAAGAACTCTGATGGAGGAACATGGGAATCAATGGAGGGTCTATTTCATTGCTCTGCAAATTCTGTTCCTTTGTCTCCAATCAACTTCCTTGAAAGAGCAGCAAAGGTTTGTAGAGACAGAACATCTGTTGTGTATGGTTCTTTGAAGTATAATTGGGGTCAAACTCATCAACGTTGTCTCAAACTTGCTTCTTCTCTTACCCAATTGGGGATTTCCCGTGGAGATGTGGTTGCCACCCTAGCACCTAATGTCCCTGCAATGTATGAGCTGCATTTTGCAGTGCCAATGGCCGGAGCCATCCTTTGTACCCTTAATTCGCGTTTGGATGCAGCTATGGTTTCAATACTGCTCGAGCATTCACAAGCAAAAATCCTTTTTGCTGACTACCAACTACTTGAAATTGCTCAAGGAGCATTGGACTTGCTTCGCAAAAAAGGAACAAAATTGCCGGTTATAGTCTTAGTTACTGATTCTGATTGCTCATCTCCGATCGACATTACACCAATCAATTACGAGTATGAGAAGCTAATGGAAGTTGGACACGATGGTTTCAAAATTGTGAAACCGCAAAGTGAATGGGATCCTATAAGTATAAATTACACCTCAGGCACCACATCTAGGCCTAAAGGAGTTGTTTACAGTCATAGAGGTGCTTATCTAAACTCTTTAGCAACAGTTCTACTCTTTCAAATGGACATCTTTCCTGTTTATCTTTGGAATGTTCCGTTGTTCCATTGCAACGGTTGGTGTCTCCCTTGGGGAGTCGCAGCGCAATTTGGCACAAATATTTGTTTAAGAAAAGTATCTCCAAAGAACATATTTGACAATATAATTCAACATAAGGTGACACACATGGCAGGAGCTCCTACTGTGCTTAACATGATTTTGAATTCCGCGTCGACTCATAGAAAGCCACTCAACCACAAGGTTTTAGTTATGACAGGTGGTTCTCCTCCACCACCGCAGATCCTTTCTAAGATGGAAGAAATTGGTTTTCGCGTTTCTCATCTTTACGGCTTGACAGAAACGTATGGTCCGGGGAGTTTTTGTGCGTGGAGACCTGAGTGGGATATGTTGCCTCCTGAAGAAAGATCAAAGATGAAAGCTAGGCAAGGTGTGCCTCATGTAGGGTTGGAGGACATTGATGTCAAAGATTCTGAAACTATGGAAAGTGTTCCAGCGGATGGAAAAACGGTTGGCGAGATAATGTTTAGAGGCAATACAGTGATGAGCGGTTATTTTAGAGATTTGAAAGCAACAGAAGAATCTTTCAAAGGTGGTTGGTTTCATAGTGGGGATTTAGCTGTGAAACATTCTGATGGCTACATAGAAATTAAGGATAGGTTGAAAGACATAATAGTCTCTGGAGGAGAAAACATTAGCTCGGTTGAGGTAGAAACTGTTTTGTATAGCCATCCGGCTGTTCTTGAGGCTGCGGTTGTTGCTAGACCGGATGATCATTGGGGTCAAACTCCTTGCGCTTTTCTGAAATTGAAAGACGGTTTTGATGAAGATGCTCAAGAAATAATTGCATTTTGTAGGGAACATTTGCCGCATTACATGGCTCCTAAAACAATCATTTTTCTAGATATGCCAAAGACTTCTACAGGGAAGATACAAAAGTATATTCTAAGGGAGAAAGCAAAGGCTTTGGGAAGTATATCTATATCCAACCCCTTGAATTGTGAAAAAGTTATTGATTGTTCAAGTAAGTTTAGGAATAATGAATAA 1824 0.4062 MNYIFKIMHWTRSLTHFRSTNIYSSKFSNFSKNSDGGTWESMEGLFHCSANSVPLSPINFLERAAKVCRDRTSVVYGSLKYNWGQTHQRCLKLASSLTQLGISRGDVVATLAPNVPAMYELHFAVPMAGAILCTLNSRLDAAMVSILLEHSQAKILFADYQLLEIAQGALDLLRKKGTKLPVIVLVTDSDCSSPIDITPINYEYEKLMEVGHDGFKIVKPQSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFQMDIFPVYLWNVPLFHCNGWCLPWGVAAQFGTNICLRKVSPKNIFDNIIQHKVTHMAGAPTVLNMILNSASTHRKPLNHKVLVMTGGSPPPPQILSKMEEIGFRVSHLYGLTETYGPGSFCAWRPEWDMLPPEERSKMKARQGVPHVGLEDIDVKDSETMESVPADGKTVGEIMFRGNTVMSGYFRDLKATEESFKGGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSVEVETVLYSHPAVLEAAVVARPDDHWGQTPCAFLKLKDGFDEDAQEIIAFCREHLPHYMAPKTIIFLDMPKTSTGKIQKYILREKAKALGSISISNPLNCEKVIDCSSKFRNNE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4371 607 Pfam AMP-binding enzyme C-terminal domain 495 569 IPR025110 -
Tpr4g4371 607 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 22 585 - -
Tpr4g4371 607 ProSitePatterns Putative AMP-binding domain signature. 229 240 IPR020845 -
Tpr4g4371 607 Gene3D - 44 480 IPR042099 -
Tpr4g4371 607 Gene3D - 481 583 IPR045851 -
Tpr4g4371 607 Pfam AMP-binding enzyme 62 486 IPR000873 -
Tpr4g4371 607 SUPERFAMILY Acetyl-CoA synthetase-like 43 580 - -
Tpr4g4371 607 CDD ttLC_FACS_AEE21_like 53 577 - -
Tpr4g4371 607 PANTHER ACYL-ACTIVATING ENZYME 22 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4371 Tpr-Chr4 50977737 50981277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4371 118 586 Miscellaneous Gene Families AT1G20560 62.633 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4371 - - gmx:100500429 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4371 4 50977737 50981277 Tpr4g4371 4 50977737 50981277 ECH