Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4370 ATGACACCAATATTTGGCCATAAGCTAAATACCCAAAATTTTATGGCTTCTACTCTACCAATGTCAAATACTCTTGGAATTCCACAATTTCTTCACAAATATCAATCACAAGTCAATTTATCCAATTATGCAACTAGACAACAAAGGCTTAAGACAAAGAAAATTACTTGCATCAACTCAGATCAAAAGGTAGAGACACATTTGCATAGGCAGAGCCAAAATGGAAGAACAATTCATCAAGAGATTAAGGGCATTGGTCCAGGAACATGGGAATCAATGGAGGGTCTACTTCATTGCTCAGCAAATTCTGTTCCTTTGTCTCCAATCAACTTCCTTGAGAGAGCAGCAAATGTTTGCAGAGACAGAACATCTGTTGTGTATGGTTCTTTGAACTATAATTGGGGTCAAACTCATCAACGTTGTCTCAAACTCGCTTCTTCTCTTACCCAATTGGGGATTTCCCGTGGGGATGTGGTTGCCACACTAGCCCCTAATATCCCTTCAATGTACGAGTTGCATTTTGCAGTACCAATGGCTGGAGCCATTCTTTGTACTCTTAATTCGCGCCTAGATGCACATATGGTTTCAGTCCTATTGGAACATTCACAATCAAAGATTCTTTTTGTGGACTACCAATTAGTTGATATCGCTCGAGGAGCATTAGACCTCCTAACCGAAAGAGCGAAAAAGAAACCAATTTTAGTCATGATCATGGACTCTGATTGCACATCTACTATTGATTTCACTTCAATTAGCTATGAATATGAAAAACTTCTAGCTATTGGACATAATGATTTTGATATTGTGAGGCCACATAGTGAATTAGATCCTATAAGTATAAATTACACCTCAGGCACAACATCTAGGCCTAAAGGAGTTGTTTTAAGTCACAGAAATGCTTATCTAAACTCTATCGCAACGGTTCTATTCTTACAAATGAGCCTATTTCCTGTTTATCTTTGGAATGTTCCGTTGTTTCATGCTAATGGTTGGTGCCTAGCTTGGGGAGTGGCAGCACAATTTGGAACCAATGTTTGTCTAAGGAAAGTATCTCCAAAAAACATATTTGACAATATAGTTCAACATAAAGTAACATATATGGGAGGAGCTCCTACGGTTTTGAACATGATTGCGAATTCTACATTGTCCGATAGAAAGGTGTTCAATCACAAGGTATCAGTATTAACAGGAGGTTCTCCTCCACCTCCGCAGATCCTTTCCATGATGGAAGAAAATGGTTTTAGTATTACTCACATGTATGGCCTCACAGAAACATGTGGTGCAGGGACTTTTTGTGCTTGGAGACCTGAGTGGGACATGTTACCGACCGAAGAAAAATCGAAGATAAAAGCTAGGCAAGGTGTGCCACATGTAGGGATGGAGGAAATTGATGTCAAAGATCCTTCGACAATGGAAAGTGTTCCGGCTGATGGAAAAACGGTTGGCGAGGTAATGTTTAGAGGGAATACATTGATGAGTGGTTATTTTAAAGACTTGAAAGCAACAGAAGACGCTTTTAAAGACGGTTGGTTTCATAGTGGAGATCTTGCCGTGAAACACTCTGATGGTTACATAGAAATCAAGGACCGATTGAAGGACATAATAGTATCCGGTGGAGAAAACATCAGCTCGATTGAGGTAGAAACGGTATTGTATAGTCATCCAGCGGTTCTCGAGGCTGCAGTTGTTGCTAGACCTGATGATCTATGGGGCCAAACTCCTTGTGCATATTTGAAATTGAAAGATGGATTTGATGCAGATGTTGAAGAGATAATAAACTTTTGTAGGGACCGTTTGCCGCATTTCATGGCTCCTAAAACAGTCATTTTTCTAGATATGCCGAAAACATCAACAGGTAAGATCCAAAAGTTTGTTTTGAGAGAGAAAGCCAAGGCCTTGGGAAGCATTTCAAATGTACCATCTGTTAGTAGCATTTCAAATGTACTATCAGTTAGTAACATGTCGTATCCTTAA 1974 0.3956 MTPIFGHKLNTQNFMASTLPMSNTLGIPQFLHKYQSQVNLSNYATRQQRLKTKKITCINSDQKVETHLHRQSQNGRTIHQEIKGIGPGTWESMEGLLHCSANSVPLSPINFLERAANVCRDRTSVVYGSLNYNWGQTHQRCLKLASSLTQLGISRGDVVATLAPNIPSMYELHFAVPMAGAILCTLNSRLDAHMVSVLLEHSQSKILFVDYQLVDIARGALDLLTERAKKKPILVMIMDSDCTSTIDFTSISYEYEKLLAIGHNDFDIVRPHSELDPISINYTSGTTSRPKGVVLSHRNAYLNSIATVLFLQMSLFPVYLWNVPLFHANGWCLAWGVAAQFGTNVCLRKVSPKNIFDNIVQHKVTYMGGAPTVLNMIANSTLSDRKVFNHKVSVLTGGSPPPPQILSMMEENGFSITHMYGLTETCGAGTFCAWRPEWDMLPTEEKSKIKARQGVPHVGMEEIDVKDPSTMESVPADGKTVGEVMFRGNTLMSGYFKDLKATEDAFKDGWFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSIEVETVLYSHPAVLEAAVVARPDDLWGQTPCAYLKLKDGFDADVEEIINFCRDRLPHFMAPKTVIFLDMPKTSTGKIQKFVLREKAKALGSISNVPSVSSISNVLSVSNMSYP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4370 657 ProSitePatterns Putative AMP-binding domain signature. 280 291 IPR020845 -
Tpr4g4370 657 PANTHER ACYL-ACTIVATING ENZYME 2-RELATED 74 636 - -
Tpr4g4370 657 Pfam AMP-binding enzyme C-terminal domain 546 620 IPR025110 -
Tpr4g4370 657 PANTHER ACYL-ACTIVATING ENZYME 74 636 - -
Tpr4g4370 657 Pfam AMP-binding enzyme 113 537 IPR000873 -
Tpr4g4370 657 CDD ttLC_FACS_AEE21_like 104 628 - -
Tpr4g4370 657 SUPERFAMILY Acetyl-CoA synthetase-like 97 631 - -
Tpr4g4370 657 Gene3D - 96 531 IPR042099 -
Tpr4g4370 657 Gene3D - 532 634 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4370 Tpr-Chr4 50959086 50963805 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4370 169 638 Miscellaneous Gene Families AT1G20560 62.076 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4370 - - gmx:100500429 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4370 4 50959086 50963805 Tpr4g4370 4 50959086 50963805 ECH