Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4368 ATGCAGGGACTGTTAAGAGTAACAAGTGAAAAAGAAATTGAGGTACTTGCAACTGAGATTGATGGCTTAAAATTCAAATTAACAGATGGTGTTGATATAGCACATGATGGCACTATTTATTTCACTGATGCTTCACATAAATACTCAGTCAAGGATTCTCTCCTAGATATAATGGAAGGGAACCCTAATGGTAGGTTTTTGAGCTATAATCCAACAACAAAAAAGACAACACTATTAGCCAGTGACCTCTATTTTCCTAATGGCGTTGCAGTCTCACCAGATCAACATTTTGTGGTGTTTTGTGAAACTGTCTTGATGAATTGCAAGAAATATTACATAGAGGGTCCAAAAAAAGGAAGCATTGAAAAGTTTTGTGACCTCCCTGGCATGCCTGATAACATTCATTATGATGGACAAGGACAATATTTGATAGGAATAGCCACGGCTTCTTCTCCTGAACTGGATATATTACTTAAATACCCCTTCATTAGGAAGGTTTTGGCACTTATCACAAAACATGTATCAAGTCTGAATGTGGCAAAGAATGGAGGAATTATCACTGTGGATTTGGAAGGAAAACCAACTTCACACTATTATGATCCCAAATTATCATTGACCGCTGGGATTAAGATTGGGAATCACATATATTGTGGCTCTATTCTATACTCTTTTATAATACGTCTTGATATTGAAAAGTACCCTGCTCTCCCCCACAATTAA 720 0.3681 MQGLLRVTSEKEIEVLATEIDGLKFKLTDGVDIAHDGTIYFTDASHKYSVKDSLLDIMEGNPNGRFLSYNPTTKKTTLLASDLYFPNGVAVSPDQHFVVFCETVLMNCKKYYIEGPKKGSIEKFCDLPGMPDNIHYDGQGQYLIGIATASSPELDILLKYPFIRKVLALITKHVSSLNVAKNGGIITVDLEGKPTSHYYDPKLSLTAGIKIGNHIYCGSILYSFIIRLDIEKYPALPHN* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4368 239 Pfam Strictosidine synthase 29 116 IPR018119 GO:0009058|GO:0016844
Tpr4g4368 239 Gene3D - 1 227 IPR011042 -
Tpr4g4368 239 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 2 230 - -
Tpr4g4368 239 PANTHER STRICTOSIDINE SYNTHASE-RELATED 2 230 - -
Tpr4g4368 239 SUPERFAMILY Calcium-dependent phosphotriesterase 3 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4368 Tpr-Chr4 50930979 50937874 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4368 - - gmx:100813217 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4368 4 50930979 50937874 Tpr4g4368 4 50930979 50937874 ECH