Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4360 ATGTCAAACACAAACACAACAACAACTCAAACTAAGACATGGTTTTTCACACCTTTGGCAATAATTCTCCCGGTTATTGTTGCAGCAGCGGTTCTCTATCGGCTCGATCCTTTCGAACCGGTTCATCTGCCGGTCAACGAACTAAACCGATCATCTCCTTTAACAGCTCCTTTACGTAACGATCACATGCAATTAGGATCTGAAGAAGTTGCAAAGGGACAAGTTTTGGGACCTGAAGATTTTGTATATGACGCTGTTATGGGTGTAGTTTATACTAGTTGTGAAGATGGGTGGATTAAACGTGTCACCGTGAATGAATCGGTGGCTGACTCGGTTGTTGAGAATTGGGTCAACACCGGTGGAAGGCCCCTTGGGCTCGCTTTTGATGGGAGTGGTGATCTCATAGTTGCTGACGCGGAGAAGGGACTGTTAAGAGTAACAAGTGAAAAAGAAATTGAGGTACTTGCAACTGAGATTGATGGCTTAAAATTCAAATTAACAGATGGTGTTGATATAGCACATGATGGCACTATTTATTTCACTGATGCTTCACATAAATACTCAGTCAAGGATTCTCTCCTAGATATAATGGAAGGGAACCCTAATGGTAGGTTTTTGAGCTATAATCCAACAACAAAAAAGACAACACTATTAGCCAGTGACCTCTATTTTCCTAATGGCGTTGCAGTCTCACCAGATCAACATTTTGTGGTGTTTTGTGAAACTGTCTTGATGAATTGCAAGAAATATTACATAGAGGGTCCAAAAAAAGGAAGCATTGAAAAGTTTTGTGACCTCCCTGGCATGCCTGATAACATTCATTATGATGGACAAGGACAATATTTGATAGGAATAGCCACGGCTTCTTCTCCTGAACTGGATATATTACTTAAATACCCCTTCATTAGGAAGGTTTTGGCACTTATCACAAAACATGTATCAAGTCTGAATGTGGCAAAGAATGGAGGAATTATCACTGTGGATTTGGAAGGAAAACCAACTTCACACTATTATGATCCCAAATTATCATTGACCGCTGGGATTAAGATTGGGAATCACATATATTGTGGCTCTATTCTATACTCTTTTATAATACGTCTTGATATTGAAAAGTACCCTGCTCTCCCCCACAATTAA 1137 0.4002 MSNTNTTTTQTKTWFFTPLAIILPVIVAAAVLYRLDPFEPVHLPVNELNRSSPLTAPLRNDHMQLGSEEVAKGQVLGPEDFVYDAVMGVVYTSCEDGWIKRVTVNESVADSVVENWVNTGGRPLGLAFDGSGDLIVADAEKGLLRVTSEKEIEVLATEIDGLKFKLTDGVDIAHDGTIYFTDASHKYSVKDSLLDIMEGNPNGRFLSYNPTTKKTTLLASDLYFPNGVAVSPDQHFVVFCETVLMNCKKYYIEGPKKGSIEKFCDLPGMPDNIHYDGQGQYLIGIATASSPELDILLKYPFIRKVLALITKHVSSLNVAKNGGIITVDLEGKPTSHYYDPKLSLTAGIKIGNHIYCGSILYSFIIRLDIEKYPALPHN* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4360 378 SUPERFAMILY Calcium-dependent phosphotriesterase 63 370 - -
Tpr4g4360 378 Gene3D - 62 335 IPR011042 -
Tpr4g4360 378 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 14 369 - -
Tpr4g4360 378 PANTHER STRICTOSIDINE SYNTHASE-RELATED 14 369 - -
Tpr4g4360 378 Pfam Strictosidine synthase-like, N-terminal 68 102 - -
Tpr4g4360 378 Pfam Strictosidine synthase 168 254 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4360 Tpr-Chr4 50845243 50856720 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4360 - - gmx:100778397 536.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4360 4 50845243 50856720 Tpr4g4360 4 50845243 50856720 ECH