Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4350 ATGTCAAACACAAACACAACAACAACTCAAACTAAGACATGGTTTTTCACACCTTTGGCAATAATTCTCCCGGTTATTGTTGCAGCAGCGGTTCTCTATCGGCTCGATCCTTTCGAACCGGTTCATCTGCCGGTCAACGAACTAAACCGATCATCTCCTTTAACAGCTCCTTTACGTAACGATCACATGCAATTAGGATCTGAAGAAGTTGCAAAGGGACAAGTTTTGGGACCTGAAGATTTTGTATATGACGCTGTTATGGGTGTAGTTTATACTAGTTGTGAAGATGGGTGGATTAAACGTGTCACCGTGAATGAATCGGTGGCTGACTCGGTTGTTGAGAATTGGATCAACACCGGTGGAAGGCCCCTTGGGCTAGCTTTTGATGGGAATGGTGATCTCATAGTTGCTGATGCAGATAAGGGACTGTTAAGAGTAACAAGTGAAAAAGAAATTGAGGTACTTGCAACTGAGATTGATGGCTTAAAATTCAAATTAACAGATGGTGTTGATATAGCACATGATGGCACTATTTATTTCACTGATGCTTCACATAAATACTCAGTCAAGGATTCTCTCCTAGATATAATGGAAGGGAACCCTAATGGTAGGTTTTTGAGCTATAATCCAACAACAAAAAAGACAACACTATTAGCCAGTGACCTCTATTTTCCTAATGGCGTTGCAGTCTCACCAGATCAACATTTTGTGGTGTTTTGTGAAACTGTCTTGATGAATTGCAAGAAATATTACATAGAGGGTCCAAAAAAAGGAAGCATTGAAAAGTTTTGTGACCTCCCTGGCATGCCTGATAACATTCATTATGATGGACAAGGACATTATTTAATAGGAATAGCCACGGCTTCTTCTCCTGAACTGGATATATTACTTAAATACCCCTTCATTAGGAAGGTTTTGGCACTTATCACAAAACATGTATCAAGTCTGAATGTGGCAAAGAATGGAGGAATTATCACTGTGGATTTGGAAGGAAAACCAACTTCACACTATTATGATCCCAAATTATCATTGACCGCTGGGATTAAGATTGGGAATCACATATATTGTGGCTCTATTCTATACTCTTTTATAATACGTCTTGATATTGAAAAGTACCCTGCTCTCCCCCACAATTAA 1137 0.394 MSNTNTTTTQTKTWFFTPLAIILPVIVAAAVLYRLDPFEPVHLPVNELNRSSPLTAPLRNDHMQLGSEEVAKGQVLGPEDFVYDAVMGVVYTSCEDGWIKRVTVNESVADSVVENWINTGGRPLGLAFDGNGDLIVADADKGLLRVTSEKEIEVLATEIDGLKFKLTDGVDIAHDGTIYFTDASHKYSVKDSLLDIMEGNPNGRFLSYNPTTKKTTLLASDLYFPNGVAVSPDQHFVVFCETVLMNCKKYYIEGPKKGSIEKFCDLPGMPDNIHYDGQGHYLIGIATASSPELDILLKYPFIRKVLALITKHVSSLNVAKNGGIITVDLEGKPTSHYYDPKLSLTAGIKIGNHIYCGSILYSFIIRLDIEKYPALPHN* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4350 378 Pfam Strictosidine synthase-like, N-terminal 68 102 - -
Tpr4g4350 378 Gene3D - 62 335 IPR011042 -
Tpr4g4350 378 Pfam Strictosidine synthase 168 254 IPR018119 GO:0009058|GO:0016844
Tpr4g4350 378 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 5-LIKE 14 369 - -
Tpr4g4350 378 PANTHER STRICTOSIDINE SYNTHASE-RELATED 14 369 - -
Tpr4g4350 378 SUPERFAMILY Calcium-dependent phosphotriesterase 63 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4350 Tpr-Chr4 50764208 50771556 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4350 - - gmx:100778397 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4350 4 50764208 50771556 Tpr4g4350 4 50764208 50771556 ECH