Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4304 ATGCCAAAGCGAAACTCCGTCGTTGTTCTCTCATCCGATGACGAAGAAGTAAACACACCCAAAACTCGTTCATTCAGTGCAACCCGTACAAAGCCCAAGCCCAAGTCCACGGGCTCTAGAGGAAGAAACAAGAAGGCCCGTGTTTCCAGTTCTGCGCCTCGTCCCTCTAAGCTTTATGAGATAAACTTGTTTGATGATGACTTCAATCAAGTGTTTACTGGGTCAAAGGTATTCGCTGGTACTCAGAGGAACACTGCAGGGGAGCTATGGGTTGATAAATACAAGCCCCATTCGCTGGAAGAACTTGCTGTTCACAAGAAAAAGGTTGAAGAAGTTAAGACGTGGTTCGAAGAAAGGTTGAAACCTTCAAAGGATGTCTACAGAAATAACGTTCTTGTCGTCACCGGGCAGGCAGGAGTTGGAAAATCTGCTACTATTCATTTAATTGCTTCTCATCTAGGCGCGGTAGTATGTGGATGGAACACACCTACACCTGTAATTTGGCAAGAGCATCTTTATAACTCTGGAACAGAAACAAAATACACTTCTAAGTTGGATGAATTTGTAAGTTTTGTTGAGAGAATACGGAAATATGGATTAATACCAACTTCCTTTACTGGGGAGTCAAAGCCTTCCGTCATATTTTTAATAGATGATCTTCCCTTGATGCATAATAAAGCTGCTTTAGGAAGACTTAAAGAATGCTTGCATCTTTTGGTGCACAAAACTCAGATACCCACAGCCATATTGGTCACAGATTATGGCAATACTGACTCAGCAGATTATAATGCACGGTCTGTGGAAGAACTTAAGACATCTCTAGAAAGTTCTGGGGCTTGTAAGATTGCATTCAATCCAATTACAGTTAATTCTATTAAGAAAGTACTTTTTAGAATATGTCAAATGGAGCAGTGTGATGTGACTGCTGACCATGTTGATTTAATAGCAAAAGCAAGTGGAGGTGACATCAGACATGCAATTACTTCTCTACAGTTTTTCTGTCTGAATCCAAATCAAGTGTGCTCTTTGTCTCAATCTACTCGCAGTCCTCATGCATTAAAAGAGGAAAGTAATAGACCTGTTGAATTAGACGATGGATCTTCCTTGTACTTCGGAAGAGATGAGACACTATCTTTGTTTCATGCCTTGGGAAAATTTTTGCACAATAAGAGGGAGACTGGAGTTGCAGCAGAATATGACCCAAATAGCTTTCTCATACAAGAAAGATTTTCAAGATTACCTTTAAAAATGGATGTCCCGGAGAAGATTCTTTGTCAAGCTCATGTGCAACCTGGTCCAGTTGCTGATTTTCTGCATGAAAATGTTCTAGATTTTTTAAATGACGAGGCAGTCGAGGATGCATGGGTTTTGTCTTCATATCTAGGTGATGCTGACATCCTTCTTTCTAAGCTTCGGGGAATGGTATCTAGTTATAATGAGGCAGAGAGTATTTTACAGTCAGCTGCTGCGTCAATTGCTGTTCGTGGGGTGCTATTTGGAAATTCTTGTCCACTTTCCTCCAGGTGGCATGCAATCCGTCGACCAAAGCTCTGGCAGGTTGAGAGAGAATCATCATACCACAGGAATGAGATGTTTAGGCAGAGAATCCCTGCTTGCAATCAGTCGAGTTCTTATCATATGTCAATTATGGCCACAGAATACATGCCTATGTTTAAATTGCTTGGAAATAGGGTTGGTAGTGGATATAATGAACCGCATCAGGAATCAGTGCAGAACTTGGATACAGAAAATTTTGATATTGACAAAATGAGTTTAGATGATGAAGCAATGGAGATCTCTGATGATGATATAGAAGATTGGTAG 1824 0.4073 MPKRNSVVVLSSDDEEVNTPKTRSFSATRTKPKPKSTGSRGRNKKARVSSSAPRPSKLYEINLFDDDFNQVFTGSKVFAGTQRNTAGELWVDKYKPHSLEELAVHKKKVEEVKTWFEERLKPSKDVYRNNVLVVTGQAGVGKSATIHLIASHLGAVVCGWNTPTPVIWQEHLYNSGTETKYTSKLDEFVSFVERIRKYGLIPTSFTGESKPSVIFLIDDLPLMHNKAALGRLKECLHLLVHKTQIPTAILVTDYGNTDSADYNARSVEELKTSLESSGACKIAFNPITVNSIKKVLFRICQMEQCDVTADHVDLIAKASGGDIRHAITSLQFFCLNPNQVCSLSQSTRSPHALKEESNRPVELDDGSSLYFGRDETLSLFHALGKFLHNKRETGVAAEYDPNSFLIQERFSRLPLKMDVPEKILCQAHVQPGPVADFLHENVLDFLNDEAVEDAWVLSSYLGDADILLSKLRGMVSSYNEAESILQSAAASIAVRGVLFGNSCPLSSRWHAIRRPKLWQVERESSYHRNEMFRQRIPACNQSSSYHMSIMATEYMPMFKLLGNRVGSGYNEPHQESVQNLDTENFDIDKMSLDDEAMEISDDDIEDW* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4304 607 MobiDBLite consensus disorder prediction 11 34 - -
Tpr4g4304 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 335 IPR027417 -
Tpr4g4304 607 MobiDBLite consensus disorder prediction 1 53 - -
Tpr4g4304 607 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 36 607 IPR004582 GO:0006281
Tpr4g4304 607 Pfam Rad17 P-loop domain 85 262 - -
Tpr4g4304 607 Gene3D - 87 268 IPR027417 -
Tpr4g4304 607 CDD HLD_clamp_RFC 287 332 - -
Tpr4g4304 607 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 36 607 - -
Tpr4g4304 607 Gene3D - 290 345 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4304 K06662 - gmx:100799826 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4304 4 50251765 50257627 Tpr4g4304 4 50251765 50257627 ECH