Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4295 ATGGAAGAAAAGGAACATGCATCAATGGCTTCTCAAAATCCTAATCACAAAAATTCCCTTTACCCAGAGGTTATAGATTCAAATCCCGAAGCATCCTCACCCTTCATCTCTAACCCTAATCCAACCTCTTCCTCTTTATACCCTAAAATCGAAGTCGACGACCTCTTCGAAGATCTCTTCCCGGATAACACCAGTCCATCCGCTCCTCCAATCGCCGACCTCGTCGAAGATGAAGATCTCTTCCCGGAAAACACCAATCCTTCCGCTCCTCCAATCGCCGCCGAAGATATCCTCATCAAGGTTCCCGGTGCCATTCTCCACCTTATTGATCAACAATACAGCTTCGAGCTCGCGATCGGCGATCTCACCATTATACGTCTCCGGCAGGGACACAATACTCTTGCCATTTACGCTCGTGTCGCCGACGAGATCCAATGGCCACTTGCCAAGGACGAGGCTGCTGTCAAGGTCGACGAATCACATTACTTCTTCTGTTTTTGCATGCCGAAGGAAAAGTTCGATTCCGATTCGAGTGATTCGAGCGACGAGGAAAAAGAAAAGGTTAAGGATAAGGAAAAGAACCGGCGGAATAAAGGTCACCAGAAAGGAGACGACGGTTTAGAATTGCTTAGCTATGGATTGACGATTGCGTCGAAAGGACAAGAGGATTTGTTGAAGGAGCTTGATGAGGTTTTGAAGGAATGTAGCAATTTCTCTGTTCAGGAGGTTTCAGAAAAGGCGAAGAAGAAAGGGGAGATTTTAGATGGTTCTTTGGCGATGGAGATGTCGCCAGAGGATTTGGACACGGTGAAGGAGAAGAAGGAATTGATGGAGGAAAGGTGTGCTGCTTATTGGACTACATTGGCTCCCAATGTGGAGGATTACAGTGGAACCGCCGCGAAGCTTATTGCGGCCGGTTCTGGACAATTAGTCAAGGGAATTTTGTGGTGTGGTGATGTTACTGTTGATAGGTTGAAATGGGGAAATGAGTTCATGAAGAAGAGGTTGGGTCCTCCTTCACAGGCTGAGATTAGTCCCCAAACCTTAAGGCGAATCAAAAGGGCTAAGAAAGTGACTAAAATGACAGAGAGTGTTGCCACCGGGGTCCTCACTGGAGTTGTGAAAGTCTCTGGGTTTTTCACCAGTTCAGTGGCAAATTCCAAAGCAGGAAAGAAATTTTTCAAGCTTCTACCTGGCGAAGTTGTGCTTGCATCATTGGATGGATTCAGCAAGCTGTGTGATGCTGTTGAAGTAGCAGGAAAAAATGTTATGTCAACATCAAACACCGTGACAACCGAGATTGTCCATCACAAATATGGAGAAGAAGCTGCCAAGGCAACTAGTGAAGGACTAGATGCTGCTGGTCACGCGGTGGGGACTGCATGGGCTGCTTTTAAGATTCGACAGGCTTTAAATCCTAAAAGTGTTCTAAAATCTGCCTCCATGGCCAAACATGCAGCTAAAGCTGCTGCAGATGAATATAAGGCTAAAAAATCCAAGTAA 1503 0.4624 MEEKEHASMASQNPNHKNSLYPEVIDSNPEASSPFISNPNPTSSSLYPKIEVDDLFEDLFPDNTSPSAPPIADLVEDEDLFPENTNPSAPPIAAEDILIKVPGAILHLIDQQYSFELAIGDLTIIRLRQGHNTLAIYARVADEIQWPLAKDEAAVKVDESHYFFCFCMPKEKFDSDSSDSSDEEKEKVKDKEKNRRNKGHQKGDDGLELLSYGLTIASKGQEDLLKELDEVLKECSNFSVQEVSEKAKKKGEILDGSLAMEMSPEDLDTVKEKKELMEERCAAYWTTLAPNVEDYSGTAAKLIAAGSGQLVKGILWCGDVTVDRLKWGNEFMKKRLGPPSQAEISPQTLRRIKRAKKVTKMTESVATGVLTGVVKVSGFFTSSVANSKAGKKFFKLLPGEVVLASLDGFSKLCDAVEVAGKNVMSTSNTVTTEIVHHKYGEEAAKATSEGLDAAGHAVGTAWAAFKIRQALNPKSVLKSASMAKHAAKAAADEYKAKKSK* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4295 500 MobiDBLite consensus disorder prediction 1 43 - -
Tpr4g4295 500 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 9 72 - -
Tpr4g4295 500 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 73 500 - -
Tpr4g4295 500 MobiDBLite consensus disorder prediction 11 43 - -
Tpr4g4295 500 MobiDBLite consensus disorder prediction 175 202 - -
Tpr4g4295 500 PANTHER SPARTIN 73 500 IPR045036 -
Tpr4g4295 500 PANTHER SPARTIN 9 72 IPR045036 -
Tpr4g4295 500 Pfam Senescence domain 302 488 IPR009686 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4295 Tpr-Chr4 50111453 50115976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4295 K19366 - gmx:100777392 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4295 4 50111453 50115976 Tpr4g4295 4 50111453 50115976 ECH
Tpr2g1125 2 13193574 13197632 Tpr4g4295 4 50111453 50115976 PCT