Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4269 ATGAAGATAGTAACTTACAACGTCAATGGTTTGCGACAACGCATAACACAGTTCGGTTCTCTCCGCAATCTTCTTCATTCATTCGACGCCGATATTATTTGCTTTCAGGAGACAAAACTCAGTAGGCAAGATGTAACTGCGGATTTGGTTATGGCAGATGGATACGAATCGTTCTTTTCTTGTACCCGAACTTCCAAGAAAGGCCGAACCGGTTATTCCGGTGTTATTACATTTTGTCGTGTAAGGTCTGCTTTTTCGAGTAACGAAGCAGCATTGCCCTTGGCAGCCGAGGAAGGATTCACAGGCTTAATGCGTGACTCTCAAACTAGTGAAGACAAATTGCCATTATTTATGGAAGAAGATCTGGGGGATTATTCAAAAGATGAGCTTCTCAGTGTTGATAGTGAAGGGCGATGCATTGTCACTGATCATGGTCACTTTGTTCTTTTCAATATTTATGGGCCTCGAGCTGGAGGCGATGACACCGAGAGGATTCAGTTTAAACAAAAATTCTACAGGATACTGCAGAAAAGATTAGAGTCTCTCCTGCATCAAGGAAGGAGAATATTTGTTGTTGGTGATCTCAATATTGCACCATTTGCAATTGATCGGTGTGATGCAGGACCTGATTTTGACAAGAATGAGTTTAGAAGATGGTTCAAATCGATGTTAATTGAAAATGGAGGCCACTTTTCTGATGTCTTTCGGGCAAAGCATCCTGATAAAAGGGATGAATACACTTGTTGGTCGCAAAGTTCAGGTGCTGAAGTGTTTAACTATGGGAGTAGAATCGACCATATTCTATGTGCTGGTTCTTGCTTACATAAATCAGATGACCTGCAATGCCATAGTTTTATAAGATGCCATGTTAAGGAATGTGAAATTCTGACTCAGTACAAACGGTTCAAACCTGAAAGTACACTGAGTGGCCACAGGTGGAAGGGAGGACAGAGCATTAAACTTGAAGGATCTGATCATGCTCCAGTTTTTGTGACTTTAATGGAAATTCCGGAGATCCCTCTTCATAGTACGCCATCTTTATCTGCTAGATATGTTCCCATGGTCCGTGGCGTACAACAAACTCTAGTGTCATTGTTGATGAAAAGACGAGTTTCTGAATCGTGCAAGATGACACACAGAGACATTTCAATGGTCAGTACTTGCGAGAAAATAGAAGAACCAGTTGACATAATTGGTTCATCTACCTCCGAATCGGATTTTCTTCCAAACAAGGATTTAGGAGGTAGCATTGTGGAACCAAATGCACTTTCCACAGGTTCTTCTCAGGAGACTGTTTCTAAATCAGGAAGTGTATATGAAAAATCAACAATTCGGAAATGCAACGAGTCCAAGAAAAAAGCTAGAAAGAGTCAATCGTCCCAGCTCTCTCTTAGGTCATTTTTTCAGAAAAGCAAAAATCTTGACAATGGTGTCAAGGACTCTTGTACTGGTTTCTCAAGTAACCAAGCAGAACCCTCACAACCTAACTCCCAATTACTTGAAACTTCTACAGTGTTTGATAATAGTAGTGATCATGTGCAAGATGAGGTGAATACTGATGTGTGTGATCAGGATTTAGCTGAACTAAATGATAGTTCTAGAAAGGAAGAAAAAAGTATTGTAGCTTCACAAGAGTGGCAAAGAATACAAAAAATTATGCAGAGCAGTATACCTCTTTGCAAAGGACATAAGGAACCTTGTATACCTCGGGTGGTAAAGAAACAAGGAGCTAATTTTGGTCGCAGATTTTATGTTTGTGCTCGTGCTGAGGGCCCTGCATCTAATCCTGAAGCAAACTGTGGCTACTTTAAATGGGCTACTTCAAAGTCCAGGAACAAGTAA 1842 0.4072 MKIVTYNVNGLRQRITQFGSLRNLLHSFDADIICFQETKLSRQDVTADLVMADGYESFFSCTRTSKKGRTGYSGVITFCRVRSAFSSNEAALPLAAEEGFTGLMRDSQTSEDKLPLFMEEDLGDYSKDELLSVDSEGRCIVTDHGHFVLFNIYGPRAGGDDTERIQFKQKFYRILQKRLESLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFDKNEFRRWFKSMLIENGGHFSDVFRAKHPDKRDEYTCWSQSSGAEVFNYGSRIDHILCAGSCLHKSDDLQCHSFIRCHVKECEILTQYKRFKPESTLSGHRWKGGQSIKLEGSDHAPVFVTLMEIPEIPLHSTPSLSARYVPMVRGVQQTLVSLLMKRRVSESCKMTHRDISMVSTCEKIEEPVDIIGSSTSESDFLPNKDLGGSIVEPNALSTGSSQETVSKSGSVYEKSTIRKCNESKKKARKSQSSQLSLRSFFQKSKNLDNGVKDSCTGFSSNQAEPSQPNSQLLETSTVFDNSSDHVQDEVNTDVCDQDLAELNDSSRKEEKSIVASQEWQRIQKIMQSSIPLCKGHKEPCIPRVVKKQGANFGRRFYVCARAEGPASNPEANCGYFKWATSKSRNK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4269 613 SUPERFAMILY DNase I-like 1 333 IPR036691 -
Tpr4g4269 613 Pfam GRF zinc finger 558 607 IPR010666 GO:0008270
Tpr4g4269 613 Pfam Endonuclease/Exonuclease/phosphatase family 4 270 IPR005135 GO:0003824
Tpr4g4269 613 PANTHER AP ENDONUCLEASE 1 603 IPR004808 GO:0004518|GO:0006281
Tpr4g4269 613 Gene3D Endonuclease/exonuclease/phosphatase 1 335 IPR036691 -
Tpr4g4269 613 PANTHER DNA-(APURINIC OR APYRIMIDINIC SITE) LYASE 2 1 603 - -
Tpr4g4269 613 MobiDBLite consensus disorder prediction 444 463 - -
Tpr4g4269 613 ProSiteProfiles AP endonucleases family 1 profile. 1 335 IPR004808 GO:0004518|GO:0006281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4269 K10772 - gmx:100781120 946.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4269 4 49822360 49828755 Tpr4g4269 4 49822360 49828755 ECH