Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4257 ATGAGAAGAATTTCAGAGAGAACAACAAACTCTCATTATACTCTCTCAATTTTCATCATCCTCATTGCTTTCATCTTCGACAATGCACAATCTATCAGATTCCCGGATCGGGTCGCCCAACCCGCCCGAGATCAATCCGATCAACATCACTTTCAAACTGCCATATTCGCTCTCGGAAGTTTCTGGAGATCGGAAGCTGTGTTCGGTTGTTTACCTGGTGTTGTTCGGACTACTGTTGGTTATTCCGGTGGATCTAAACCTAATCCTGAATATCGAAGTTTTGGTGATCACGCTGAATCTGTTCAGGTTGAGTATGATCCACGGCTAATTGGTTTTAGGGAACTCCTTGATATTTTTTGGTCAAGCCATGATCCCAGGCAGGTGTATGGTCAAGGTCCTGATGTGGGTAACCAGTACAGATCTATTATTTTTGTTAATGGAACTGAAGAATCGAGAATTGCTTCTGTCAGCAAAGAACAGGAGCAAACCAGGTCAAGAAGCAGCATTGTGACTACTCAAATTCAGCAACTTGGAGCATTTCACCCTGCAGAACCAGAGCACCAGAAATTTGAACTCAAGCAAAATACATTCCTTCTTCAGTTAATTGGTAACCTGCCTGAAGAGGAGCTTGAGAGGTCAAGCCTGGCAACAAAATTGAATGGATATGTAGCTGAACTTTGCCCTCCAAATATCCAAAAGCATATTGATGCAAAAATCAACGATATTATAAAAAAGGGTTGGCCCATTTTAAGGGATTTATAA 762 0.4173 MRRISERTTNSHYTLSIFIILIAFIFDNAQSIRFPDRVAQPARDQSDQHHFQTAIFALGSFWRSEAVFGCLPGVVRTTVGYSGGSKPNPEYRSFGDHAESVQVEYDPRLIGFRELLDIFWSSHDPRQVYGQGPDVGNQYRSIIFVNGTEESRIASVSKEQEQTRSRSSIVTTQIQQLGAFHPAEPEHQKFELKQNTFLLQLIGNLPEEELERSSLATKLNGYVAELCPPNIQKHIDAKINDIIKKGWPILRDL* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4257 253 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 51 205 IPR002569 GO:0008113
Tpr4g4257 253 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 53 193 IPR002569 GO:0008113
Tpr4g4257 253 Pfam Peptide methionine sulfoxide reductase 53 194 IPR002569 GO:0008113
Tpr4g4257 253 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 13 252 - -
Tpr4g4257 253 Gene3D Peptide methionine sulphoxide reductase MsrA 46 246 IPR036509 GO:0008113
Tpr4g4257 253 SUPERFAMILY Peptide methionine sulfoxide reductase 46 195 IPR036509 GO:0008113
Tpr4g4257 253 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE A5 13 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4257 Tpr-Chr4 49725733 49730417 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4257 K07304 - gmx:100782739 424.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4257 4 49725733 49730417 Tpr4g4257 4 49725733 49730417 ECH