Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4246 ATGAAACCAGCTTCAGCTTCATTGTTGTTGTTGTTTCTGTGTTTCTCTTGCGTGTTTGCTTTCATTCCTCATCGTACGCTGCTCCTCGACAATAACAACAACAACAACTTGAATGAAGAAGGCAAATACCTCACCACTAAAGAGCTATGGTTCAATCAAACTCTCGATCACTTCTCTCCCTATGATCACCGTCAATTCCAGCAACGTTACTATGAATTCCTAGACTATTTCAGGATTCCGGATGGACCAGTTTTTCTGGTAATAGGTGGTGAAGCACCATGCAATGGGATAGTAAATGACTATATTGGTGTATTGGCAAAGAAGTTCGGAGCGGCCGTGGTTTCTCTTGAACATCGGTATTATGGAGTGAGTACCCCATTTGATAATTTAGCGACAGAAAATCTGAAATATCTTTCATCCAAGCAGGCTCTCTTTGATTTGGCTGTTTTTCGCCAGTATTATCAGAATTCTTTAAATGCAAAGCTGAATAGAACCGGAGTTGAAAATCCATGGTTCTTTATCGGTGGCTCGTATTCTGGAGCACTCAGTGCATGGTTCCGTCTTAAGTTTCCCCATTTAACATGCGGGAGTCTTGCAAGTTCTGCAGTTGTTCTTGCTATTCAAGACTTCGTCGAATTTGATCAACAGATTGGCGAATCGGCTGGTCCTGAGTGTAAAGCAGCATTACAAGAAACCACTCAACTCGTCGAATCAAAACTTGCAGCCAATGGACCGGCACTGAGGGCAACTTTTAAAGCAGATGATCTTATAGTTGATGGAGACTTCTTGTATTATCTGGCTGATGCTGCTGTTATAGCGTTTCAATATGGAAATCCAGATAAATTATGCAAGCCTATGGTTGATGCAAAGAAGGCCGGGGAGGATTTGGTGGAAGCTTATGCCAAATATGTCAACGAGTACTATGCTGGAACCTTTGGCGTAAATGTACAAATTTATGACCAGGAATATTTGAAAAAAACCGAAATCAATGAAGACAGTTCATCTCGATTATGGTGGTTTCAAGTTTGCACTGAAGTTGGGTACTTCCAGGTGGCTCCGTCAAATGATAGCATACGTTCCTCAAAAATTGACACACAATACCATTTGGACCTGTGCAAAAATGTCTTTGGAGATGGTGTCTTTCCTGATATTGATGCTACTAATATATACTATGGAGGCACAAAAATTGCTGGTTCAAAAATTGTATTTACAAATGGCTCACAGGATCCATGGCGTCATGCTTCCAAACAAACTTCATCCACTGATTTGCCTTCCTACCTTATCAAGTGTAATAACTGTGGCCATTGTACTGATTTGCGAGGATGTCCTCAATCTCCTTTGGTCATTGAAGGTAATGAGAAGAATTGCAGTTCCCCTGATGCAGTTCATAAAGTAAGGCAAAAGGTTCAAGAAGACATGGACTTATGGCTATCTGAGTGCATCAACACAGACACAGGAAGGAGTTTTATATAA 1473 0.41 MKPASASLLLLFLCFSCVFAFIPHRTLLLDNNNNNNLNEEGKYLTTKELWFNQTLDHFSPYDHRQFQQRYYEFLDYFRIPDGPVFLVIGGEAPCNGIVNDYIGVLAKKFGAAVVSLEHRYYGVSTPFDNLATENLKYLSSKQALFDLAVFRQYYQNSLNAKLNRTGVENPWFFIGGSYSGALSAWFRLKFPHLTCGSLASSAVVLAIQDFVEFDQQIGESAGPECKAALQETTQLVESKLAANGPALRATFKADDLIVDGDFLYYLADAAVIAFQYGNPDKLCKPMVDAKKAGEDLVEAYAKYVNEYYAGTFGVNVQIYDQEYLKKTEINEDSSSRLWWFQVCTEVGYFQVAPSNDSIRSSKIDTQYHLDLCKNVFGDGVFPDIDATNIYYGGTKIAGSKIVFTNGSQDPWRHASKQTSSTDLPSYLIKCNNCGHCTDLRGCPQSPLVIEGNEKNCSSPDAVHKVRQKVQEDMDLWLSECINTDTGRSFI* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4246 490 Pfam Serine carboxypeptidase S28 53 442 IPR008758 GO:0006508|GO:0008236
Tpr4g4246 490 SUPERFAMILY alpha/beta-Hydrolases 111 374 IPR029058 -
Tpr4g4246 490 Gene3D alpha/beta hydrolase 50 441 IPR029058 -
Tpr4g4246 490 PANTHER PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED 26 482 - -
Tpr4g4246 490 PANTHER OS10G0511600 PROTEIN 26 482 - -
Tpr4g4246 490 SUPERFAMILY alpha/beta-Hydrolases 77 212 IPR029058 -
Tpr4g4246 490 Gene3D Serine carboxypeptidase S28, SKS domain 209 362 IPR042269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4246 Tpr-Chr4 49598805 49605186 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4246 - - aprc:113857786 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4246 4 49598805 49605186 Tpr4g4246 4 49598805 49605186 ECH