Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4244 ATGGCTACGGCGTCGACGTCATCGTCAACCACCACCACGACGCCGTCGTTTCTATCACCGACACAAAGATATGCTGCCGCAGCATTGTTCGGACTATCCCTTCACGAATCCCAACTTAATCAAACCCGAATTCTCCCCTTACCCGCTTCAGTTGACTCCATTTCCAACACCAACCGAATCAGCAGTAGTAGCTCTAGCAGTAGTGATTCTGTCTCCGATGACCCCGATCTTTGGGTTCACCAACATTCCGGTTTGCTCCGCCCCGTTTTCAAGTTTCTAGATATTGATTCTTCTGCATGGTATGGATTAGAGGAAACTTCTGGTTCTGCTTCTGCTACACACCATGTTGGACCCTTTATGAGACTGCTTTCACAAGAATCTGATGATGCTTCTGCTGAATCTGCTCAAAGGCTAGACAAAGAACTTGCATTGTCAAAAGCTGTTGATGCTATAGTACTTGGCATGGAAAAGAATTTGCAGCCTTCTAAGTCAAAAAGAGAGAGGCTTCATGAATACGAACAACGGTGTCGCGAAAAATTTTCGGCTCCTGATGTTCAATCTAATTCTGAAAAGATTGATGTTGATGTAAACTTGGAAACCCAGGATGAGACTGATGTTGCTCCTTTAATCAACTTTGAAGAAACGCACGAGGGACCTGATAATAGTAAAATTGATGAGAAACCAATTGAAGAAGTGGCGATGCTTAGTGATCAGAGGAAAGTGACGGTTCTCTACGAGCTTCTATCTGCGTGTCTTTCGGATTTGCGTGATGATGACAAAGAATGTAAGCGGAGAAGAAAGGGTTATGATGCTCGTCATCGTGTGGCTCTGAGGTTGCTGGCAACATGGCTTGATGTCAAGTGGACAAAAATGGAAGCGATTGAGACCATGGTTACTTGTTCTGCAATGGCTATAATTAAAGAGCAAGAATTAAAGAAAGAAGAAGATCAAGCAAAAGGAGGCAAGTGGGCGAAATTGAAGCGTGGTGGTATTATTGGCGCTGCTGCAATTACTGGGGGAACCTTGTTGGCTCTTACTGGTGGGTTAGCTGCACCAGCAATTGCTGCAGGACTTGGAGCTCTAGCTCCAACTTTGGGTACTCTGATCCCTGTAATTGGAGCCAGTGGATTTGCTGCAGCTGCCGGTGCTGCAGGAACTGTTGCTGGTTCTGTTGCTGTGGCTGCATCATTTGGCGCTGCTGGTGCTGGACTTACGGGAACCAAAATGGCTAGGAGAGTAGGTGGTGTTGATGAGTTTGATTTCAAAGCTATCGGAGAAAACCATAACCAAGGCAGGCTAGGGGTTGAGATCTTGATCTCCGGATTTGTCTTTGAGAAGGAAGATTTTATAAGGCCATGGGAAGGACTGAATGACAACTTGGAAAGGTATTCACTTCAATGGGAGTCTAAAAATCTGATTGCTGTGAGCACTGCGATTCAGGATTGGCTTACTTCAAGACTTGCAATGCAGCTGATGAAGCAAGGGGCAATGATGACCGTTTTGAGCACACTTGTAACTGCTCTGGCTTGGCCAGCTGCATTACTTGCAGCAACTGATTTCATTGACAGTAAATGGACAATAGCTATTAACAGATCAAATAAAGCAGGAAAGTTGCTTGCTGAAGCATTATTGAAAGGATTGCAGGGAAATAGGCCTGTGACACTTGTAGGTTACTCTCTTGGGGCAAGAGTTATTTTTAAGTGCCTGCAGTATTTGGCTAAAACAGAAAATGGAGCTGAACTAGTAGAAAGAGTTGTACTTCTTGGAGCACCCATCCCAATCAAGGATGAGAATTGGGAAGCTGCTAGAAAGATGGTAGCAGGAAGGTTTATAAATGCTTATTCAAGGAATGACTGGATGCTTGGAGTTGCCTTTCGTGCCAGTTTACTCACAAAAGGATTAGCCGGAATTGAACCAGTTGATATTCCTGGGATCCAAAATGTTGATGTCACAGATCACATTGAAGGCCATTCATCTTATCTGTGGGCTACACAACAGATCTTAGACCAACTTCAGTTAGATACATGTTTTCCAGTTTATAATGGCGTTTCTTGCATACAGTCAGGAGCAGAGCAAGAAATTTGGATGAAGGGAGGAGGGCAAGACCAAAAAGTATAG 2118 0.4438 MATASTSSSTTTTTPSFLSPTQRYAAAALFGLSLHESQLNQTRILPLPASVDSISNTNRISSSSSSSSDSVSDDPDLWVHQHSGLLRPVFKFLDIDSSAWYGLEETSGSASATHHVGPFMRLLSQESDDASAESAQRLDKELALSKAVDAIVLGMEKNLQPSKSKRERLHEYEQRCREKFSAPDVQSNSEKIDVDVNLETQDETDVAPLINFEETHEGPDNSKIDEKPIEEVAMLSDQRKVTVLYELLSACLSDLRDDDKECKRRRKGYDARHRVALRLLATWLDVKWTKMEAIETMVTCSAMAIIKEQELKKEEDQAKGGKWAKLKRGGIIGAAAITGGTLLALTGGLAAPAIAAGLGALAPTLGTLIPVIGASGFAAAAGAAGTVAGSVAVAASFGAAGAGLTGTKMARRVGGVDEFDFKAIGENHNQGRLGVEILISGFVFEKEDFIRPWEGLNDNLERYSLQWESKNLIAVSTAIQDWLTSRLAMQLMKQGAMMTVLSTLVTALAWPAALLAATDFIDSKWTIAINRSNKAGKLLAEALLKGLQGNRPVTLVGYSLGARVIFKCLQYLAKTENGAELVERVVLLGAPIPIKDENWEAARKMVAGRFINAYSRNDWMLGVAFRASLLTKGLAGIEPVDIPGIQNVDVTDHIEGHSSYLWATQQILDQLQLDTCFPVYNGVSCIQSGAEQEIWMKGGGQDQKV* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4244 705 Pfam Protein of unknown function (DUF726) 325 673 IPR007941 -
Tpr4g4244 705 PANTHER TRANSMEMBRANE/COILED-COIL PROTEIN (DUF726) 15 681 - -
Tpr4g4244 705 Gene3D alpha/beta hydrolase 477 673 IPR029058 -
Tpr4g4244 705 PANTHER TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 4 TMCO4 15 681 IPR007941 -
Tpr4g4244 705 SUPERFAMILY alpha/beta-Hydrolases 541 624 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4244 Tpr-Chr4 49579224 49591402 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4244 - - cam:101513647 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4244 4 49579224 49591402 Tpr4g4244 4 49579224 49591402 ECH
Tpr2g1066 2 12510723 12518264 Tpr4g4244 4 49579224 49591402 PCT