Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4243 ATGGCCGCGGTTTGTAAGCATATGCGGCAATTATCTCGATTAAGAGGTTTAGGGCTTTCCAGATTATCACCATCACAATCATCACCATCATCTTCTTCGTTTCAAACTTCAACAATATTCGATCCATATTTTTCACCTCCACTTTCAACCACAAGATCTTTTTCTCAATTGGTCAAATCCAATGGCAAACACTTGTTTCTCGTTGACACATTGGCCCTTGTTAGGAGATTAGAAGCACAAGGAGTACCTTCAAAGCAAGCTGAAGCTATAACTGCTGCTATAACTGAAGTTTTGAATGATAGTCTTGAAAATGTGTCTCAAGCATTGGTATCAAAAGGAGAAATGCAAAAAACTGAAATGATTCAAGAGTCCAACCTGTCCAAATTCAAATCAGAAGTACAAAGCTCACAGGGGCACCATTTTTCACTGTTGCAACATGAGACTGAGAAGCTTAGGAATGATATAGAGAAGATGCGCAGTGAACTGAGGTATGAAATGGACAAAGTTACTGCTGGACAGCGATTGGATTTGAACCTTGAAAGGGGGAGAACTAGGGAGGAACTGTCAAATCAGAGTGCTGAAACTAACAACCTGACCAACAAACTTGATAGGGAGATTCATTCTTTAAGAGCACAACTGGAAGCCGCTAAATACGAGGTCATAAAATACTGCATAGGAACACTTGTTTCAATCTCTGCTGTTGGTCTCGCTGTACTTCGTATCTTGATGTGA 732 0.403 MAAVCKHMRQLSRLRGLGLSRLSPSQSSPSSSSFQTSTIFDPYFSPPLSTTRSFSQLVKSNGKHLFLVDTLALVRRLEAQGVPSKQAEAITAAITEVLNDSLENVSQALVSKGEMQKTEMIQESNLSKFKSEVQSSQGHHFSLLQHETEKLRNDIEKMRSELRYEMDKVTAGQRLDLNLERGRTREELSNQSAETNNLTNKLDREIHSLRAQLEAAKYEVIKYCIGTLVSISAVGLAVLRILM* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4243 243 Coils Coil 185 219 - -
Tpr4g4243 243 Pfam Coiled-coil domain-containing protein 90-like 68 242 IPR024461 -
Tpr4g4243 243 PANTHER FMP32-LIKE PROTEIN 1 243 - -
Tpr4g4243 243 Gene3D - 69 170 - -
Tpr4g4243 243 Coils Coil 141 161 - -
Tpr4g4243 243 PANTHER UNCHARACTERIZED 1 243 IPR024461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4243 Tpr-Chr4 49572372 49578415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4243 - - mtr:MTR_8g076260 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4243 4 49572372 49578415 Tpr4g4243 4 49572372 49578415 ECH