Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4238 ATGAACCCTCCTCCGCCGTGGACTCCCGAAGACGATTTTCTCCTCAAGAACGCAATTGAGGATGGAGCTTCTCTGGAATCGTTGTCCAGAGGAGTTGTTGCTTTCTCCCGGAGGTACTCCCTTGCGGAATTGAGAGAACGCTGGGGTTCTCTTCTCTATGATTCTGATGTTTCGGGTGAAGCTTCTGCTGCGATGACCAAGTTGGAGATCGCCAAGGCTAACGGTAACGAAATCAAAGAAGCTTCCGCTGCAGACGCTGCTGCCCCAAAGAGGAAACGTCAGAGCATTCGCAGGATGTACTACACCATGAGGAAGAAGATTCGCACCGAGGTTTTTTTTAATACTGTTGATATGGCTTTACATGATGAGATGTGTATTGAAAATAATGTCACTGAAAAAAATATTGGGGGGCCTGGGTTTAATAATATTAATCATAGTTTAAATAAGGATGTCAATAATAATTTGTTTAATTATGGGAATCAATTGGGGTTAGTGGGATCTGGGGTGGGGTCCTCTCATTCAATGAGTGAAGATCCACTGTGGAAGACAATTGAGGATGTCTCTGCGCCTAACATGCCGGTTCATGTTAGTCTTGAAAATGAAAATGGAGGTTCTGAGTCGAAAGAGAAGATTCCCCATGGTTCTGATGCTCTCTTGAACTCTGCGAATGGAGACGAGCTTATGTTTATGAATATAGATGAGAAAGCTGAAACTGCCGCGAATAAGAAGTCTGATGATAATGTCGAGCGTTCTCCTTGTGGCATTCAAGGCGATGATACGTCTGGTGTTGGTGAGCCTCAGAAGTTGGTTGCAGAAACAAAGCTTGCTATGGCAAATGGTCCGTCTGCTGAGTTAGAGGATGTTGCCATCTCGACAGGCAGCAGTCAAGGTGATTCAGATTTTGTTTTTGATTGTGGAAATGAAGTCCAATCTTCTGGTGCAGCGCAAAGTTCTCACCCTAAGCCTGCAAATGAATTTAGGTTCTGTTCATTGAACACTGAGGACCCTAATGTCCCATCTGATGGCGCTGAGGATGTAAATGAATCCACTGGAGTTCCTATTTCATTAAGTGCACCCGTTGTAGTAGTTCCTAGTTCTGTGAACGTATCCTCTGTAGTAGGTCCTAGTTCTGCTAACATATCTGCTGTAGTAGTTCCTAATATCTTGACTCCAACACCCATATCAATTGTTAAAGAGGTGGGTTATCCAGATTCCTCTATCAGTAATCAAAGAAGAAATGAACCAGATAGAAGCCTGAAGAGAAAAGACATTCCATCAAAGTCTTTTGTAGCTTCTCAGTCAGTTCGACCAGGATTAGTGCCTAATATAAATTCAAGGAAGGAAAACCGTGCTGCACCGAAAACTGAAAATCCTGCAAAGAACTTGATTTCTGCAGTTTCTAGACAGAGTAATGTCATTGTCAACCCAACTCAAAGCAGAATAGTCCATGCAAATGCAAAGCATTCCTCATATGGACTTCCGGCACAAGAGGTAATTATTGCTCTTCCTTCACCTGATGATACACATCCAAAGGAAGAGGAACATAAGAATTTACCTGATATGGAAGCAAAATTAAGATGTATCGATCAGGAAAGAGGCGACGATGACGACGATGATAGTGATGAAGATGAGAACGATGACGAGCATGAAATTCCTTACTTTTCTGATGTTGAGGGAATGATTCTTGAAATGGACTTGGATCCAGCTGATCAAGATACAAATGCAAGTACCGAAGTCATGAGATTTCAATGCGAAGAAACTAAGAGGACCATCATGAGATTGGAGCAATGTGCTCAGTCCTTTGTGCGTAGAAACATTGCATCTCGAGGTGCACTTGCTGTATTATATGGGCGCAATCTGAAGAAATATATTTATAAACCTGAGGTGATAATTGGCAGATCAACTGAGGACACAGCTGTGGATATTGACTTGACTAGAGCAGGGCCATATACTCACAACATCTCTAGAAGACAAGCTTCGATAAGGCTGGATGCAGATGGTTCTTTCATCCTCAAAAATCTTGGCAAGAAATCTATATTCTTGAATGGGAAAGAAATTCCTAAAGGACATCAGCGGGGTCTGAGTGATGGTAGTTTTATCGAGATTAGGGACCTGTCATTCATCTTTGATTTGAATAAGGAATGTGTGGAGAGGTTTATAGAAGATGAGGATGAGGATGAACACAGAGAGATGCAAGGATGA 2202 0.4242 MNPPPPWTPEDDFLLKNAIEDGASLESLSRGVVAFSRRYSLAELRERWGSLLYDSDVSGEASAAMTKLEIAKANGNEIKEASAADAAAPKRKRQSIRRMYYTMRKKIRTEVFFNTVDMALHDEMCIENNVTEKNIGGPGFNNINHSLNKDVNNNLFNYGNQLGLVGSGVGSSHSMSEDPLWKTIEDVSAPNMPVHVSLENENGGSESKEKIPHGSDALLNSANGDELMFMNIDEKAETAANKKSDDNVERSPCGIQGDDTSGVGEPQKLVAETKLAMANGPSAELEDVAISTGSSQGDSDFVFDCGNEVQSSGAAQSSHPKPANEFRFCSLNTEDPNVPSDGAEDVNESTGVPISLSAPVVVVPSSVNVSSVVGPSSANISAVVVPNILTPTPISIVKEVGYPDSSISNQRRNEPDRSLKRKDIPSKSFVASQSVRPGLVPNINSRKENRAAPKTENPAKNLISAVSRQSNVIVNPTQSRIVHANAKHSSYGLPAQEVIIALPSPDDTHPKEEEHKNLPDMEAKLRCIDQERGDDDDDDSDEDENDDEHEIPYFSDVEGMILEMDLDPADQDTNASTEVMRFQCEETKRTIMRLEQCAQSFVRRNIASRGALAVLYGRNLKKYIYKPEVIIGRSTEDTAVDIDLTRAGPYTHNISRRQASIRLDADGSFILKNLGKKSIFLNGKEIPKGHQRGLSDGSFIEIRDLSFIFDLNKECVERFIEDEDEDEHREMQG* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4238 733 ProSiteProfiles Forkhead-associated (FHA) domain profile. 629 686 IPR000253 GO:0005515
Tpr4g4238 733 Pfam N-terminal region of micro-spherule protein 7 69 IPR025999 -
Tpr4g4238 733 SUPERFAMILY SMAD/FHA domain 616 711 IPR008984 GO:0005515
Tpr4g4238 733 MobiDBLite consensus disorder prediction 410 424 - -
Tpr4g4238 733 SMART FHA_2 628 686 IPR000253 GO:0005515
Tpr4g4238 733 MobiDBLite consensus disorder prediction 406 457 - -
Tpr4g4238 733 CDD FHA 626 709 IPR000253 GO:0005515
Tpr4g4238 733 PANTHER FHA DOMAIN PROTEIN 172 729 - -
Tpr4g4238 733 PANTHER FHA DOMAIN PROTEIN 4 154 - -
Tpr4g4238 733 PANTHER MICROSPHERULE PROTEIN 1 172 729 IPR037912 GO:0002151|GO:0031011|GO:0071339
Tpr4g4238 733 PANTHER MICROSPHERULE PROTEIN 1 4 154 IPR037912 GO:0002151|GO:0031011|GO:0071339
Tpr4g4238 733 MobiDBLite consensus disorder prediction 531 554 - -
Tpr4g4238 733 MobiDBLite consensus disorder prediction 532 551 - -
Tpr4g4238 733 Gene3D - 565 722 - -
Tpr4g4238 733 Pfam FHA domain 629 702 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4238 Tpr-Chr4 49514870 49520805 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4238 - - mtr:MTR_8g076470 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4238 4 49514870 49520805 Tpr4g4238 4 49514870 49520805 ECH