Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4225 ATGTTTATAAGTGATGTGAATCACCAAAGAATCAAAACAAATGGAATATATATACACATAGCAGAAAAAGGAACAGGACCACTTGTTCTTTTGCTTCATGGTTTCCCAGAAATATGGTATGCTTGGAGACACCAACTCAACTACTTGTCACAACATGGTTATCATGCTGTTGCACCTGATTTAAGAGGATATGGTGACTCTGATTCTCCTCTAAATCCTAATTCCTACACTCTTCATCACATCGTTGGTGATCTTATTGGTCTTCTTGATCATTTTGGTCAACAACAGGCATATGTAGTTGGATCTGATTGGGGAGCAAACATTGGATGGCACCTAAGTCTATTTAGGCCTGATAGAGTGAAGGGATTTGTTGCTCTAGGTGTTCCTTACTTTCCAAGGTCTCCAACAGATAAAACTGTTGAAACTATAAGAAAAATATATGGAGATGGAACTCATGTTTACCAATTCCAGGAACCAGGTCGCGCAGAGAGAGCTTTTGCTAGATATGATTTCTTGACAGTAATGAAGAAATTTTTACTCATTACTAGGACACATTTTATAGCAGCTCCTTCTGGCATGGAGATTATTGATTTCTTGCCAACTCCTTCGGTTTTGCCGTCGTGGATAACTGAGGAAGAACTCGTGGTCTTTGCAGACAAATTCCAAGAATCTGGTTTCACAGGCGCATTCAATTACTACCGCGCAATGGACTTAAACTGGGAGCTTCTAGCACCATGGCAAGGATCAAAGATAACAGTTCCAACTAAATTTATTGCTGGAGACAAAGATGTTGGTTTTCAAAATGGTACAAAAGATTTTGTGGAAGGTGATATTTTCAAGAGTCTTGTTCCTAACCTCGAAGTGGTTATACTAGATGGCCATCACTATATACATCAAGAGAAAGATCAACAAGTTTCAGAGGAAATCCTTTCCTTCATCAGTAAATTATCTTTGGATTAG 960 0.3865 MFISDVNHQRIKTNGIYIHIAEKGTGPLVLLLHGFPEIWYAWRHQLNYLSQHGYHAVAPDLRGYGDSDSPLNPNSYTLHHIVGDLIGLLDHFGQQQAYVVGSDWGANIGWHLSLFRPDRVKGFVALGVPYFPRSPTDKTVETIRKIYGDGTHVYQFQEPGRAERAFARYDFLTVMKKFLLITRTHFIAAPSGMEIIDFLPTPSVLPSWITEEELVVFADKFQESGFTGAFNYYRAMDLNWELLAPWQGSKITVPTKFIAGDKDVGFQNGTKDFVEGDIFKSLVPNLEVVILDGHHYIHQEKDQQVSEEILSFISKLSLD* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4225 319 Gene3D alpha/beta hydrolase 3 317 IPR029058 -
Tpr4g4225 319 PANTHER EPOXIDE HYDROLASE 2 317 - -
Tpr4g4225 319 PANTHER BIFUNCTIONAL EPOXIDE HYDROLASE 2 2 317 - -
Tpr4g4225 319 SUPERFAMILY alpha/beta-Hydrolases 3 315 IPR029058 -
Tpr4g4225 319 PRINTS Epoxide hydrolase signature 33 51 IPR000639 GO:0003824
Tpr4g4225 319 PRINTS Epoxide hydrolase signature 53 68 IPR000639 GO:0003824
Tpr4g4225 319 PRINTS Epoxide hydrolase signature 99 112 IPR000639 GO:0003824
Tpr4g4225 319 PRINTS Epoxide hydrolase signature 113 126 IPR000639 GO:0003824
Tpr4g4225 319 PRINTS Epoxide hydrolase signature 253 269 IPR000639 GO:0003824
Tpr4g4225 319 PRINTS Epoxide hydrolase signature 290 312 IPR000639 GO:0003824
Tpr4g4225 319 Pfam alpha/beta hydrolase fold 27 134 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4225 Tpr-Chr4 49354097 49356159 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4225 4 317 Acyl Lipid Metabolism Gene Families AT3G51000 65.204 1.54e-156 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4225 - - gmx:100818894 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4225 4 49354097 49356159 Tpr4g4225 4 49354097 49356159 ECH