Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4215 ATGGTAATTGAAGCTAAAGTTTCAGAACAAAAATGGCGATACACATGGGAATCACAATCCCACACACCAACACTCCGTTTACTCCTTTTCCCATTCTCCAAAACCCTAAACCCTTCACTCAATCTCACCGTTCATCTTCATTCACCACCTTCATTCCTCACTCTCACTTCTTCCTCCTCCGCCACCGCTCCTCTCTCCCTTAGGGTTCCGATTCCCAATGTCTTACTCGACGCCGATTTCCCTCCCACCGTCCGATCATTCTCCGACCACATCGAAGTCAAACTCCTTCTCTTACTCCCCGTCGATCACCCTGCGCTTTCCGCACTCCATCAATCCTCGCCGTTACCTCAACCTCTCCTAATGGAATATGATGTGGATAAATTGTCTTCAGCTGAAAAAGTTGATTTTGTTTGTAGAAGTTGCGGACTCGGTTTGACCAAAAAGCCTATCAGGAATTTTGTTGAAAAGCCATCAGCGAATTGGAGGGAAATAGCTGACAATTGGTTTGGGACTTGTTGTTGTTCGTTTGGAGGTATAAGCGAGAAGCTGGTGATGAGGTATGTGAATTCTCACACGTGCGCGCAGGGGATGTGCCTGTTGAGCTCTACATCTGTCACTTTTTGCAAGGATGATCTTGTGGAAAGTAACTTTCCTGAACGGTGTGGACGGCTGCATGAGTGTAGTTATGTAGCAGATGATTTTGGAGGCGATGCTGTTAGTGAGGGCGCTGGAAACTTTGGGCTGGATGAGGAAAGAACTTCAACCTGCAGTGATGCTGGTGAAGCGAATGGTGTTTTTGATGAAAATGCAAGGGTTGCCCATCCTGAGAATGGACAGCTTTCTGTGAATTTTAACGAAGTTGCTAAGAATGAATCTGATTGCAGTGGTTATTCTCGTATATGTCTAGATTTGAATGACGCTAAAGATGTGACCAACATTCCTAGTTGCTGTACTCAGACAAGCACTCTAGTAGATGAAGATGGTGAACATCATTTATCTACAAATGCTAGGAAGATTGAAACTGTGGAAATTGTGGGGATTCAGAAGACTTTGCTTAATGGTTTTCTTGAAGATGTTTTCATGGCTAGATCATCAAATCTGTCGAAGGATATTTATTGGCATGAATTTACATGCCCGCTATGCACAGCGCTCCTTGGAGCCTACCCATGCTGTGAGGGTTGTGCGCCTGTAGACGGAGGAGTACGATTGTTCAAATGTTATATTTCAACCTGTGTGCCAGTTTTAGGATCAGGCGACATTTTCAGCAAGTACACGGTAGACAAAATGTTTGCAAATCGGTTGATGGAGTGTGCAAATGATGAGTCAACATTTCGGTTTGTCGTTAGAGATCTGCAAACCAAATCTCCTGTCCTGCAAATCATTCTCCTAAATCCAGATACTTGGTCCTGTTCTGGTAATTGTTCTGGTACAGAGGACAAAGACCCAGATCCTAAATTACAGTTACGGCCGGTCATCAAGGTCCTTTTTTCTGATTCTGAAGCTACAACAGAATCTCAATTAAGGATGATTGAGGAATGGGCAGCAAAGAATTCAGCTGAAGACATTTTTATGCTAACTTATCAAATACAAGACCTGGTGGATGCATTGATGTCAGCAAAAGATATGTATCCACCATCATGTGCTTCTCTTCATGGTTTAATTTTGTCATCTTTGCAACGGTAG 1683 0.4355 MVIEAKVSEQKWRYTWESQSHTPTLRLLLFPFSKTLNPSLNLTVHLHSPPSFLTLTSSSSATAPLSLRVPIPNVLLDADFPPTVRSFSDHIEVKLLLLLPVDHPALSALHQSSPLPQPLLMEYDVDKLSSAEKVDFVCRSCGLGLTKKPIRNFVEKPSANWREIADNWFGTCCCSFGGISEKLVMRYVNSHTCAQGMCLLSSTSVTFCKDDLVESNFPERCGRLHECSYVADDFGGDAVSEGAGNFGLDEERTSTCSDAGEANGVFDENARVAHPENGQLSVNFNEVAKNESDCSGYSRICLDLNDAKDVTNIPSCCTQTSTLVDEDGEHHLSTNARKIETVEIVGIQKTLLNGFLEDVFMARSSNLSKDIYWHEFTCPLCTALLGAYPCCEGCAPVDGGVRLFKCYISTCVPVLGSGDIFSKYTVDKMFANRLMECANDESTFRFVVRDLQTKSPVLQIILLNPDTWSCSGNCSGTEDKDPDPKLQLRPVIKVLFSDSEATTESQLRMIEEWAAKNSAEDIFMLTYQIQDLVDALMSAKDMYPPSCASLHGLILSSLQR* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4215 560 Pfam HECT-like Ubiquitin-conjugating enzyme (E2)-binding 41 547 IPR019193 -
Tpr4g4215 560 PANTHER E3 UBIQUITIN-PROTEIN LIGASE E3D FAMILY MEMBER 13 559 IPR019193 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4215 - - cam:101505599 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4215 4 49255395 49259356 Tpr4g4215 4 49255395 49259356 ECH