Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4200 ATGGATTTAGGACAGGTACTACACATGAATGGAGGTGTGGGAGAAAAAAGTTACGCAAACAACTCATTACTTCAGCAAAAGGTAATTTCTACGACAAAACTTCTAAGAGATGAATCCATAATCAATGTGTGTGGCAACACACTTCCCAAAAGCTTGGCAATTGCAGATTTGGGTTGTTCTTGTGGACCAAACACTCTGTTGGTGATATCAGAAACTATCAAAGTTGTGGAAAAGCTTTATAAAAAAATGAATCATAAATCTCCAGAATATAAGATCTTTTTGAACGATCTACCGGGGAACGACTTCAATACTATATTCCAGTCCCTCGACACCTTTAAGGAAAATCTACGCAATGAAATCAAAACTGAAATGGATCATTGCTACATCTTTGGGGCTCCCGGTTCCTTTTATAGCAGGCTTTTTCCTGATAAAAGTATGCATTTTGTCCATTCCTCTTATAGCCTTCAATTTCTATCTAAGGTACCCAAGGGTGTAGATGACAACAAAGGCAACATTTACTTGTCTAGCACAAGCCCTTCAAATGTCCTTAAGGCTTACTATGATCAATATAAAACAGATTTCTCTTATTTTCTCAAGTGCCGTGCCCAAGAATTAGTTGAAGGGGGTTGTTTATTTGTAACTTTAATTGGAAGACAATCTGAGGATCCATCAAGCAAGGAGATTTCTTACCTATGGGATTTCATGTCGGTGGCTCTTAATGATATGGTTTTGGAGGGAATTATAAAAGAAGAAAATCTCAACTCTTTCAACGTTCCTCTCTATTATCCATCTCTATCTGAAGTGAAGTTGGAAGTTCTCACAGAAGGATCATTTTCCATCAATCAATTGGATTCTTCTCAAATAATTTTTAAAGAACTTGATAATTATAAGGATGCTTTTAACTCTAAAATTTCAGGATCACTTACAGAAGATGGATACAATTTGGGACAATGCATAAGGGCTATCGCTGAACCTTTGCTAGTTGGTCATTTTGGTGAAAGTGTCACTAAAGAGGCTTTTAACCGCTTTCAAAAATATGTAACTGATAATGTGCCCAAAGATAGAACTAAGATCACCAATATTACTATGATATTGACTAAAAGGCCATAA 1110 0.3622 MDLGQVLHMNGGVGEKSYANNSLLQQKVISTTKLLRDESIINVCGNTLPKSLAIADLGCSCGPNTLLVISETIKVVEKLYKKMNHKSPEYKIFLNDLPGNDFNTIFQSLDTFKENLRNEIKTEMDHCYIFGAPGSFYSRLFPDKSMHFVHSSYSLQFLSKVPKGVDDNKGNIYLSSTSPSNVLKAYYDQYKTDFSYFLKCRAQELVEGGCLFVTLIGRQSEDPSSKEISYLWDFMSVALNDMVLEGIIKEENLNSFNVPLYYPSLSEVKLEVLTEGSFSINQLDSSQIIFKELDNYKDAFNSKISGSLTEDGYNLGQCIRAIAEPLLVGHFGESVTKEAFNRFQKYVTDNVPKDRTKITNITMILTKRP* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4200 369 Pfam SAM dependent carboxyl methyltransferase 42 367 IPR005299 GO:0008168
Tpr4g4200 369 PANTHER SAM DEPENDENT CARBOXYL METHYLTRANSFERASE-RELATED 1 367 - -
Tpr4g4200 369 Gene3D Vaccinia Virus protein VP39 21 289 IPR029063 -
Tpr4g4200 369 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 367 IPR005299 GO:0008168
Tpr4g4200 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 368 IPR029063 -
Tpr4g4200 369 Gene3D - 6 353 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4200 Tpr-Chr4 49092940 49095100 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4200 K21483 - gmx:100813166 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4200 4 49092940 49095100 Tpr4g4200 4 49092940 49095100 ECH