Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4184 ATGGCTTCTTGTATATCTACTCCTTCGCCTTCTTTTAGATTACAACTCACAAGAAAAAGCTTCATTGCTGCACCTTCACTCCCTCTCTATCACCGAAGTAAGTGTGAATTGAACAGGAGGAGTTTAACATTTAAAGGAATTATGGCAACTGGAGTTTCAGTCATGGCTTCCACTCTTACTTCACAAGCTCAACCATCTCAAGAGAAGGAACTTGAAAGATTAGCATACAAACCGGAAGGATACAATTATTGGAAGTGGAGGGATCATAAAATTCACTATGTTGTGCAAGGAGAAGGCCCTCCTATTGTCCTTATTCATGGTTTTGGTGCATCTGCTTTCCACTGGAGATACAACATTCCAGAATTGGCTAAGAAACACAAGGTTTATGCCATAGACTTGCTTGGATTTGGGTGGAGTGACAAAGCACTCGTTGATTATGATGCCATGGTGTGGAGGGATCAAGTCGTGGACTTCTTGAAAGAAATTGTAAAAGAACCTGCAGTTTTGGTTGGAAATAGCCTTGGAGGATTTACTGCTTTGATCGCAGCAACTGGGTTGCCTGAGTTTGTCAGTGGGGTTGCTCTGCTGAATTCTGCAGGACAATTTGGTGATGGAAAGGAACGTAAAACTTCCGAGGAAACATCTCTACAAAAGTTTTTCCTAAAACCTTTGAAGGAAGTTTTCCAGCGTGTAGTTCTTGGATTTATATTTTGGCAATCGAAGCAACCCGCTCGGGTTGAATCAGTCTTAAAAAGTGTGTATGTAAACTCTTCCAATGTGGACGACTATCTTGTTGAATCTATAACAAGGCCAGCTCAAGACCCCAATGCCGGAGAAGTTTATTACAGGTTAATGACACGTTTCATGATGAATCAAAGCACGTACACTCTAGATTCCGTGTTAAGTGATCTCTCTTGCCCGTTGCTTCTGCTATGGGGTGACCTTGATCCATGGGTTGGTCCAGCCAAAGCTAACAGGATCAAAGAGTTTTATCCAAAATCAACACTTGTTAACTTGCAAGCCGGGCATTGCCCACACGATGAGGTACCCGAGCTTGTGAACAAGGCTTTATTGGATTGGCTTGCCACCCTTACTCCACAAGTGACTCTCCAAGCAGTTTGA 1122 0.4278 MASCISTPSPSFRLQLTRKSFIAAPSLPLYHRSKCELNRRSLTFKGIMATGVSVMASTLTSQAQPSQEKELERLAYKPEGYNYWKWRDHKIHYVVQGEGPPIVLIHGFGASAFHWRYNIPELAKKHKVYAIDLLGFGWSDKALVDYDAMVWRDQVVDFLKEIVKEPAVLVGNSLGGFTALIAATGLPEFVSGVALLNSAGQFGDGKERKTSEETSLQKFFLKPLKEVFQRVVLGFIFWQSKQPARVESVLKSVYVNSSNVDDYLVESITRPAQDPNAGEVYYRLMTRFMMNQSTYTLDSVLSDLSCPLLLLWGDLDPWVGPAKANRIKEFYPKSTLVNLQAGHCPHDEVPELVNKALLDWLATLTPQVTLQAV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4184 373 PANTHER PHEOPHYTINASE, CHLOROPLASTIC-LIKE ISOFORM X1 19 364 - -
Tpr4g4184 373 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 19 364 - -
Tpr4g4184 373 PRINTS Alpha/beta hydrolase fold signature 125 140 IPR000073 -
Tpr4g4184 373 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Tpr4g4184 373 PRINTS Alpha/beta hydrolase fold signature 183 196 IPR000073 -
Tpr4g4184 373 SUPERFAMILY alpha/beta-Hydrolases 82 361 IPR029058 -
Tpr4g4184 373 Pfam Alpha/beta hydrolase family 102 355 IPR000073 -
Tpr4g4184 373 Gene3D alpha/beta hydrolase 78 365 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4184 Tpr-Chr4 48865854 48869860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4184 101 351 Acyl Lipid Metabolism Gene Families AT3G10840 24.671 7.41e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4184 - - gmx:100776976 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4184 4 48865854 48869860 Tpr4g4184 4 48865854 48869860 ECH