Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4182 ATGAGTTTGGAAATGGCGGCGGAATCATCGGAAGGCGAAGAAGAAGGTAAGTTAAGCGGAGGTAACCAAATATTGATCGTCGATGAAGACCTCCGTGAATTAGGCAAAAAAGCCGCCTGGAGTGTTAGCTCCTGCAAAACCGGCAACGGCGTTTCTTCTCTTCGAGATGACAATCTCGAAACCTATTGGCAATCTGATGGTGCTCAACCTCATTTTGTTAACATTCAATTCCAAAAGAAAGTTCGATTACAATTAGTTGTGCTGTATGTGGATTTCAAGCTGGATGAGAGTTATACGCCGAGCAAGATTTCCATTCGCGCCGGAGATGGCTTTCATAACCTCAAGGAGATAAAGGCTGTGGAACTTGTGAAGCCAACTGGTTGGCTTTATCTCTCGTTATCTGGAGTTGATCCTCGTGAAACTTTTGTCAACGCATTTATGTTGCAAATTGCTGTGTTGTCAAACCATCTCAATGGAAGGGATACTCATGTGCGGCAGATCAAAGTTTATGGGCCTAGACCGAACCCCATTCCACAGCAGCCATTTCAATTTACTTCAAGAGAGTTCATCACTTACTCTACTATAAGATGA 591 0.4365 MSLEMAAESSEGEEEGKLSGGNQILIVDEDLRELGKKAAWSVSSCKTGNGVSSLRDDNLETYWQSDGAQPHFVNIQFQKKVRLQLVVLYVDFKLDESYTPSKISIRAGDGFHNLKEIKAVELVKPTGWLYLSLSGVDPRETFVNAFMLQIAVLSNHLNGRDTHVRQIKVYGPRPNPIPQQPFQFTSREFITYSTIR* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4182 196 CDD APC10 32 171 IPR016901 GO:0005680|GO:0031145
Tpr4g4182 196 PIRSF APC10 6 196 IPR016901 GO:0005680|GO:0031145
Tpr4g4182 196 Pfam Anaphase-promoting complex, subunit 10 (APC10) 25 193 IPR004939 -
Tpr4g4182 196 SUPERFAMILY Galactose-binding domain-like 26 172 IPR008979 -
Tpr4g4182 196 PANTHER ANAPHASE-PROMOTING COMPLEX 10 11 196 IPR016901 GO:0005680|GO:0031145
Tpr4g4182 196 Gene3D - 2 173 - -
Tpr4g4182 196 ProSiteProfiles DOC domain profile. 10 196 IPR004939 -
Tpr4g4182 196 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 10 11 196 - -
Tpr4g4182 196 SMART APC10_2 31 195 IPR004939 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4182 K03357 - gmx:100526925 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4182 4 48844375 48848315 Tpr4g4182 4 48844375 48848315 ECH