Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4173 ATGGTGAATCTTGTGGCAGCACAAAAACCATTGATTCATGGCCTAATGAAAATGGCAGGTATAAGACCCTACACAATAGAGATAGAATCAGGGACAACAATGAGTTTTTGGGTACCTTCAGAAACCATATCAAAGCCCAAGAAAAAAGAAGCAAAACCTCAAATAATCGCGAAGCCTACTAAACCCGTGGTTGTTTTAGTCCATGGTTTTGCCGGGGAAGGAATAGTGACGTGGCAATTTCAAGTTGGCGCGTTAACAAAAAAGTACTCTGTCTATATTCCGGATCTTCTATTCTTTGGAGGATCCGAAACAGACAAAACCGAACGGTCTCCAAGGTTTCAAGCGGAGTGTTTGGTGACAGCATTAAGGAAACTTGGTGTCGAAAAATGTATCGTCGTTGGTTTTAGTTATGGTGGAATGGTGGCGTTTAAAATGGCAGAGATGTATCCTGAATTAGTTCAAGCTATGGTTATATCAGGATCTATTTTGGCTATGACTGATTCAATTAGTGCCACTTCATTGCAAGAACTTGGATTTTCTTCTTCTTCTGAACTTTTGTTGCCTAATTCTGTTAAAGGTCTTAAGGCGCTTTTGTCTATTGCAGCTTATAAAAAGCTTTGGTTTCCTGATCGTTTACATAGAGACTTTCTTGAGGTGATGTTCACAAATAGAAAGGAACGTGGTGAGCTACTAGAAGGCTTAGTAGTTAGTAATAAAGACATCAACATTCCAAATTTCCCACAGAGGATACATCTTCTATGGGGTGAAAATGATCAAATTTTCAAATTGGAACTTGCTCAAACTATGAAAGGACAACTAGGAGATGGCACAACGTTTGAAAGCATAGAGAAAGCTGGTCATCTTGTTCACTTGGAGCGACCATGTGTTTATAATAGATGCCTCAAGAAATTTATTGATTCCTTCTTAGCTTCAAACGAAGCTAAATAA 948 0.3882 MVNLVAAQKPLIHGLMKMAGIRPYTIEIESGTTMSFWVPSETISKPKKKEAKPQIIAKPTKPVVVLVHGFAGEGIVTWQFQVGALTKKYSVYIPDLLFFGGSETDKTERSPRFQAECLVTALRKLGVEKCIVVGFSYGGMVAFKMAEMYPELVQAMVISGSILAMTDSISATSLQELGFSSSSELLLPNSVKGLKALLSIAAYKKLWFPDRLHRDFLEVMFTNRKERGELLEGLVVSNKDINIPNFPQRIHLLWGENDQIFKLELAQTMKGQLGDGTTFESIEKAGHLVHLERPCVYNRCLKKFIDSFLASNEAK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4173 315 PANTHER SI:DKEY-122A22.2 2 308 - -
Tpr4g4173 315 Gene3D alpha/beta hydrolase 11 308 IPR029058 -
Tpr4g4173 315 Coils Coil 311 315 - -
Tpr4g4173 315 SUPERFAMILY alpha/beta-Hydrolases 21 305 IPR029058 -
Tpr4g4173 315 Pfam alpha/beta hydrolase fold 62 171 IPR000073 -
Tpr4g4173 315 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 308 - -
Tpr4g4173 315 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Tpr4g4173 315 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Tpr4g4173 315 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Tpr4g4173 315 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Tpr4g4173 315 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Tpr4g4173 315 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Tpr4g4173 315 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Tpr4g4173 315 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4173 Tpr-Chr4 48744724 48750235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g4173 62 157 Acyl Lipid Metabolism Gene Families AT4G15960 33.663 2.43e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4173 - - gmx:100816070 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0986 2 11820148 11828185 Tpr4g4173 4 48744724 48750235 ECH
Tpr4g4173 4 48744724 48750235 Tpr4g4173 4 48744724 48750235 ECH
Tpr2g0986 2 11820148 11828185 Tpr4g4173 4 48744724 48750235 PCT