Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4166 ATGTGGCGAAGGAGGTTTAGCACCACCGTCTCTGGCAGCGCAGCCGCATTAAAAGACAAAAAATGGGACGCACTAATTATCGGCGGCGGCCATAACGGTCTCACAGCAGCAGCTTATCTCGCCCGTGGAGGTCTCTCAGTTGCTGTCCTCGAACGCCGCCACATAATCGGCGGCGCCGCCGTAACAGAGGAGCTAATTCCAGGTTTCAAGTTTTCTCGTTGCAGTTACCTTCAAAGTCTTCTCCGACCTGCAGTTATCAATGAGCTGGATTTAGCAAAACACGGATTGAAGCTTCTGAAGAGAAATCCTTCGTCGTTTACGCCTTGTCTTGATGGAAGATACCTTCTCTTAGGGCCTGATAAGGATCTTAATCACTCTCAGATTTCCAAATTCTCAAAAGCTGATGCAGAAGCTTATCCAAAATATGAGAGTCAGCTTGAGAACTTCTGTAAATTCATGGATCTAGTGCTGGATTCGTCTCCACCTGAATCTTTGCAACATAAATCATCTCTTAATGAACAACTGAAGAATAAATTACAGAATTCAGTGTTTTGGGCCAGTTGTTTGCGGCACGCAGCCTCGATGGGGCAAAAGGATATGGTAGACTTTATGGACCTTTTGTTATCACCAGCTTCTAAAGTTTTGAATAACTGGTTTGAGGCAGATGTTCTGAAGGCAACACTTGCAACAGATGCTGTGATAGGATCTACGGCAAGTGTCCACACCCCGGGAAGTGGTTATGTTCTGCTACATCATGTAATGGGTGAAACTGATGGAGAACGTGGAATTTGGTCATATGTTGAAGGAGGAATGGGCTCAATATCCAATGCTATTGCTAGTGCTGCTGTGGCAGCTGGAGCTCATATTGTAACGGATGCTGAGGTGTCTCAGTTGTTGATTAAAAACTCTAGCACTGTCCATGGGGTGATTCTGGCTGACGGTACCGAAGTGCATGCTTCAGTTGTTCTGTCTAATGCAACACCGTATAAAACTTTCATGGATTTAGTGCCCAATAATGTCCTCCCTGATGATTATTTCCGGGCAATTAAGCACTCTGACTACAGCTCTGCCACAACAAAAATAAATGTAGCAGTTGATAAATTGCCCCAATTTCAGTGTTGCAAGTTAGATCATTCGCAAGCTGGCCCAGAGCATGTTGGCACTATTCATATAGGTTCAGAGAGCATGGACGAGATTCATTCTGCATCTGAAGATGCGGTGAATGGAATACCATCAAGAAGACCGGTCATTGAGATGACGATTCCTTCCGTATTGGACAAAACTATATCTCCACCAGGTAAGCATGTGATAAACCTGTTTGTGCAGTATACACCCTACAAACCATCGGATGGGGACTGGCAAGATCATGACTACAGAGAATCATTTGCTCAAAAGTGCTTTGCATTGATTGATGAATATGCACCTGGTTTCAGCACATCAGTAATTGGTTATGACATGCTGACTCCACCAGATCTTGAAAGGGAAATCGGTTTGACAGGAGGAAATATATTTCATGGTGCTATGGGTTTGGATTCACTTTTCCTCATGCGACCTGTAAAAGGATGGTCAAACTATAAGACTCCACTTAAAGGTTTATACTTATGCGGAAGTGGAGCACATCCTGGCGGTGGAGTTATGGGAGCACCTGGACGAAATGCTGCCAATTTAGTTCTTCAGGATGTCAAAAAAACATGA 1695 0.4431 MWRRRFSTTVSGSAAALKDKKWDALIIGGGHNGLTAAAYLARGGLSVAVLERRHIIGGAAVTEELIPGFKFSRCSYLQSLLRPAVINELDLAKHGLKLLKRNPSSFTPCLDGRYLLLGPDKDLNHSQISKFSKADAEAYPKYESQLENFCKFMDLVLDSSPPESLQHKSSLNEQLKNKLQNSVFWASCLRHAASMGQKDMVDFMDLLLSPASKVLNNWFEADVLKATLATDAVIGSTASVHTPGSGYVLLHHVMGETDGERGIWSYVEGGMGSISNAIASAAVAAGAHIVTDAEVSQLLIKNSSTVHGVILADGTEVHASVVLSNATPYKTFMDLVPNNVLPDDYFRAIKHSDYSSATTKINVAVDKLPQFQCCKLDHSQAGPEHVGTIHIGSESMDEIHSASEDAVNGIPSRRPVIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPSDGDWQDHDYRESFAQKCFALIDEYAPGFSTSVIGYDMLTPPDLEREIGLTGGNIFHGAMGLDSLFLMRPVKGWSNYKTPLKGLYLCGSGAHPGGGVMGAPGRNAANLVLQDVKKT* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4166 564 PANTHER FAD/NAD(P)-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 563 - -
Tpr4g4166 564 Gene3D - 223 369 IPR036188 -
Tpr4g4166 564 PANTHER PHYTOENE DEHYDROGENASE 1 563 - -
Tpr4g4166 564 Gene3D - 21 112 IPR036188 -
Tpr4g4166 564 Pfam Flavin containing amine oxidoreductase 33 367 IPR002937 GO:0016491
Tpr4g4166 564 SUPERFAMILY FAD/NAD(P)-binding domain 19 440 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4166 Tpr-Chr4 48668936 48676061 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4166 - - gmx:100781247 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4166 4 48668936 48676061 Tpr4g4166 4 48668936 48676061 ECH