Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4149 ATGGCTTTAGTAGCTACAAATAAGACAACATCACGAGCAGCAACAATGATTATATGGCTAATCTCGTGGAGTCTTATTACGATCTATCATGTCAGTTTAGCAGAAAGTGTTTTGGAAGAAAAAAAATCAGAAAATGTTGTTATTAAAGAAAGACATTTCTTCTGCTATAGTGGGAAGTCTTCCTATGAACGTGTTTGGCCTGAAATGAATTTTGGTTGGAGAATTGTAGTAGGGTCTATTGTTGGATTTTTTGGAGCTGCATTGGGAAGTGTAGGAGGGGTAGGAGGTGGAGGAATTTTTGTCCCTATGCTTACTTTGATCATTGGTTTTGATCCGAAGTCTTCTACAGCCCTCTCTAAGTGTATGATTACAGGAGCAGCAGGGTCAACAGTGTATTACAATCTAAGGCTTAGACACCCAACACTAGACATGCCACTTATAGATTATGATCTTGCTTTGCTCTTCCAACCTATGCTAATGCTAGGAATAAGCATTGGTGTTGCATTTAATGTCATGTTTGCTGATTGGATGGTCACCATTTTGCTTATCATTCTATTCATTGGTACATCCACTAAAGCTTTAGTCAAAGGCATTGACACATGGAAAAAAGAAACAATTATGAAGAAGGAAGCAGCTCAAATGTTGGAATCAGGTTCTACTCCTGATTATGCTTCTGAAGAAGACTACAAGTCACTACCAGCTGATCTACAAGATGAAGAGGTTCCTTTACTAGACAACATTTACTGGAAAGAATTATCAGTTCTTCTGTATGTTTGGGTGGCTTTTCTCATTGTTCAAATTATTAAGACATACAGCAAAACTTGTTCCATAGAGTATTGGATTCTTAATTCCTTGCAGGTGCCTATTGCAATTTCTGTTACACTTTTTGAAGCCATATGCTTATGCAAAGGAACTAGAGTAATTTCATCAAGGGGAAAGGAAATTAATTGGAAGTTTCATAAGATTTGTCTTTACTGTTTCTGTGGAATAATAGCTGGTATGGTTAGTGGTTTGCTTGGCCTAGGAGGTGGCTTCATTTTGGGACCACTATTTTTGGAATTAGGAATTCCTCCTCAGGTAGCTAGTGCTACATCAACATTTGCTATGGTTTTCTCTTCCTCCATGTCAGTGGTACAATATTACCTTCTAGATCGCTTCCCAGTACCCTATGCTTCGTACTTAGTTTTGGTTGCAACCATAGCTGCATTAACTGGTCAACATGTGGTGAGAAAGATAATTGCCATCTTTGGTAGAGCATCTATCATTGTCTTCATATTAGCCTTCACCATTTTTGTGAGCGCAATCAGTTTAGGTGGGGTGGGAATAGTGAACATGGTTGAGAAGATGGAAAATGAAGATTATATGGGGTTTGACAATATCTGCCACCATGGGAAAAAATATGGGGTTTGA 1410 0.3837 MALVATNKTTSRAATMIIWLISWSLITIYHVSLAESVLEEKKSENVVIKERHFFCYSGKSSYERVWPEMNFGWRIVVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTALSKCMITGAAGSTVYYNLRLRHPTLDMPLIDYDLALLFQPMLMLGISIGVAFNVMFADWMVTILLIILFIGTSTKALVKGIDTWKKETIMKKEAAQMLESGSTPDYASEEDYKSLPADLQDEEVPLLDNIYWKELSVLLYVWVAFLIVQIIKTYSKTCSIEYWILNSLQVPIAISVTLFEAICLCKGTRVISSRGKEINWKFHKICLYCFCGIIAGMVSGLLGLGGGFILGPLFLELGIPPQVASATSTFAMVFSSSMSVVQYYLLDRFPVPYASYLVLVATIAALTGQHVVRKIIAIFGRASIIVFILAFTIFVSAISLGGVGIVNMVEKMENEDYMGFDNICHHGKKYGV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4149 469 PANTHER CEREBLON 17 462 - -
Tpr4g4149 469 Pfam Sulfite exporter TauE/SafE 75 188 IPR002781 GO:0016021
Tpr4g4149 469 Pfam Sulfite exporter TauE/SafE 326 432 IPR002781 GO:0016021
Tpr4g4149 469 PANTHER PROTEIN, PUTATIVE-RELATED 17 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4149 Tpr-Chr4 48480077 48485978 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4149 - - gmx:100789748 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4149 4 48480077 48485978 Tpr4g4149 4 48480077 48485978 ECH
Tpr2g0967 2 11599276 11603918 Tpr4g4149 4 48480077 48485978 PCT