Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4145 ATGAGATATAGGATTTCGTATTTGATGGATGAGATCTGGGAGAAGGCTGTTGAAACGGCGTTAGAAGGCGAGAAGGATCACGCTTCCGCTAAAACGCTAACACTTGACGGCGCCGTTAAGTGCGTTCAAGGACGTTTACCTCCTCCGAGCCTTCTAGAAAGGTTCCAGAACCTTCAGCATCTTTCGATTGCAAACGTCGGCGTTTCATCTCTGGAGCAGTTCCCGAGGCTCCGGAGTTTGCAGAAGTTGAATCTCTCTGATAACCGGATCGCCGGTGGTTTGGAGTTTTTGGTTCAGGCTGGACTTGATTCGCTTCGTGATCTCGATTTATCGAACAATAGGATTCAGTTTATCGAAGATCTTGCTCCGTTGGCGCAGGTGAAGCTTGTTTCGTTGGATCTGTATGAGTGTCCTGTTACTCGTGTTAAGGATTATCGATCTAGGGTTTTTGGTTTGATTAAGTCGTTGAAGTATTTGGATAAGATGGATGCGGAGGAGAATGAGAGGCCCGAGTCGGATGATGAGGAAGAGGACGATGAGGAAGAGGAGGAGGAAGAAGAGGATGATCCTGGGAGTGGTGAGATTGATGGAGGAGAGGAAGATCGACATTTTGGGTTGAATAATGGACATGGTGAAGGTGTTGATGTTGATGGAGTTGTTGATGCTGATGAGGATGAGGAGAGTGATGCGGATGAGGAGGTGACAGAGTCTTCGAGGGGAGGAGTGAATGGGGTGAACTTGAACCATCAGGAGAATGGGTTTCATGTTGCTCCTGTTGATGTTGAAGAGGAAGATGATGATGAGGATTCTGGAGAGGAGATTGATGAGGAGGAGGGTGATGATGATGATGTTGTTGAGGTTCATGCGATTGATGATAGTGATGATGATGAGGATGGGGTTGAGTATGATGAAGATGACGATGATGATGATGACGAGGATGATGATGAGGTGGATAATGATGAAGGGGATTTTGCTGAACCTGAGAGTACTTCTGGACGGTTGGTGAGCACCGAAGGTGAGATTGATGGGCATGAGCAAGGTGAGGAAGATGGAGATGAAGATGACAATGGAGAGACCGGAGAAGATGAGATAGCTGTAGAAGAAGATGACGAAGATGATGACGATGATGATGGAGAGTTTGAAGATGATGATGAAGAAGAAGACTTTGGTGCTGGATATCTTGTTCAGCCAGTTGGACAGGCTGAGGCTCTCAATGATGTGGTTGTTGACACTGATGAGGTTGAAAACGAGGACATTGAAGAAGAGGAAGAAGTTGATGATGATGATGAAGACAACGATGTTCAAGAAGTGTTGCCACCTCCTGCCTCTTCACACCCCAAGAGAAAGAGGGACAATGATGATGAAGACGACGAGGACGATGAAGATGAAGAAGGATTCACAAAGCCATCCAAGAAGCATCACTAA 1425 0.4639 MRYRISYLMDEIWEKAVETALEGEKDHASAKTLTLDGAVKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRSLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQFIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEDDEEEEEEEEDDPGSGEIDGGEEDRHFGLNNGHGEGVDVDGVVDADEDEESDADEEVTESSRGGVNGVNLNHQENGFHVAPVDVEEEDDDEDSGEEIDEEEGDDDDVVEVHAIDDSDDDEDGVEYDEDDDDDDDEDDDEVDNDEGDFAEPESTSGRLVSTEGEIDGHEQGEEDGDEDDNGETGEDEIAVEEDDEDDDDDDGEFEDDDEEEDFGAGYLVQPVGQAEALNDVVVDTDEVENEDIEEEEEVDDDDEDNDVQEVLPPPASSHPKRKRDNDDEDDEDDEDEEGFTKPSKKHH* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4145 474 Pfam Leucine-rich repeat 64 173 - -
Tpr4g4145 474 SUPERFAMILY L domain-like 48 164 - -
Tpr4g4145 474 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 14 467 IPR045081 -
Tpr4g4145 474 MobiDBLite consensus disorder prediction 408 435 - -
Tpr4g4145 474 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Tpr4g4145 474 MobiDBLite consensus disorder prediction 343 390 - -
Tpr4g4145 474 MobiDBLite consensus disorder prediction 163 474 - -
Tpr4g4145 474 MobiDBLite consensus disorder prediction 167 195 - -
Tpr4g4145 474 Gene3D Ribonuclease Inhibitor 11 178 IPR032675 -
Tpr4g4145 474 MobiDBLite consensus disorder prediction 218 233 - -
Tpr4g4145 474 MobiDBLite consensus disorder prediction 260 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4145 - - mtr:MTR_8g077860 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4145 4 48458713 48462493 Tpr4g4145 4 48458713 48462493 ECH