Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4133 ATGAGTACCATGAATCTTAACACATGTTTCATGTTCAATCAACTTACTATTACTGCTTCAACAACCACAACCAGATCCAGATCCAGATCCAGAATCTCATCTTTCTATTTTACCAAAATACCCATTTCAATTTCAACCATTAAACCAAAAACCCATAATCATAATCACCAATTTTCAGTCTCATCTTTGCTCACAAAACAAGAAACAATAGAAACTGAAGAAAAACCAGTTTTCAGTTTCAACACTTATATGATTGAAAAAGCGACTAGGGTTAACAAAGCCCTAGACGACGCCGTTTCGTTACGCGAACCGTTAAAAGTTCACGAAGCTATGCGATACTCACTCCTCGCCGGCGGAAAACGTGTCCGGCCGGTTCTCTGTTTAGCCGCCTGCGAACTCGTCGGCGGAACCGAATCCATGGCGATGCCAGCCGCTTGTGCTGTTGAAATGATTCACACCATGTCGTTAATCCACGACGATCTTCCTTGTATGGATAACGACGATCTCCGACGAGGTAAACCGACGAATCACAAAGTATTCGGTGAAGACGTGGCGGTTCTCGCCGGAGATGCGTTACTCGCTTTCGCCTTTGAGCATATCGCGGTGTCGACGAAAGGAGTTTCTCCGGCGAGAATTGTCCGTGCAATCGGAGAATTAGCGAAATCGATCGGCTCCGAAGGACTCGTAGCCGGTCAAGTTGTTGATATAAACTCAGAAGGTTTATCAGATGTTGGATTAGAGAGACTTGAATTCATTCATCTTCATAAAACTGCTGCTTTGTTAGAAGGTGCTGTTGTTCTTGGTGCAATTCTTGGTGGTGGTAGTGATGAAGATGTTGAAAAATTGAGAAAATTTGCTAGATATATAGGTTTATTGTTTCAGGTTGTTGATGATATTCTTGATGTTACAAAATCTTCACAGGAATTAGGTAAAACTGCTGGGAAAGATTTGGTAGCTGATAAAGTTACTTATCCAAAGCTTTTGGGAATTGAAAAATCTAAAGAATTTGCTGAGAAATTGAACAGTGATGCACAAGATCAGCTTTCTGGGTTTGATTCTAATAAATCTGCTCCTTTGATTGCTTTGGCTAATTACATTGCTTATAGGCAAAACTAA 1116 0.4104 MSTMNLNTCFMFNQLTITASTTTTRSRSRSRISSFYFTKIPISISTIKPKTHNHNHQFSVSSLLTKQETIETEEKPVFSFNTYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCLAACELVGGTESMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTKGVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAEKLNSDAQDQLSGFDSNKSAPLIALANYIAYRQN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4133 371 SFLD Isoprenoid Synthase Type I 82 369 - -
Tpr4g4133 371 Pfam Polyprenyl synthetase 107 340 IPR000092 GO:0008299
Tpr4g4133 371 ProSitePatterns Polyprenyl synthases signature 2. 289 301 IPR033749 -
Tpr4g4133 371 SUPERFAMILY Terpenoid synthases 81 354 IPR008949 -
Tpr4g4133 371 Gene3D Farnesyl Diphosphate Synthase 77 371 IPR008949 -
Tpr4g4133 371 CDD Trans_IPPS_HT 107 369 IPR000092 GO:0008299
Tpr4g4133 371 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC 20 371 - -
Tpr4g4133 371 SFLD Polyprenyl Transferase Like 82 369 - -
Tpr4g4133 371 ProSitePatterns Polyprenyl synthases signature 1. 156 172 IPR033749 -
Tpr4g4133 371 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 20 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4133 Tpr-Chr4 48309211 48310917 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4133 K13789 - zju:107424859 529.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4133 4 48309211 48310917 Tpr4g4133 4 48309211 48310917 ECH
Tpr2g0941 2 11365354 11368911 Tpr4g4133 4 48309211 48310917 ECH
Tpr2g0941 2 11365354 11368911 Tpr4g4133 4 48309211 48310917 PCT