Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4126 ATGGCACCTTCTTATTGTGTGAATGAGAACAAAGAGTGTGTGAAATGGGTTGAGACATACTTCAAAGACTGTCTTTGCAATTTGAGAGATGATATATCATTCAGTTTGGGACTCATGAGTTTAGTGTCATGGGGAGTTGCTGAAATTCCTCAGATAATCACTATTTTTCGTACCAAGTCTAGTCATGGAGTTTCACTTGCCTTTCTCCTCACTTGGGTTGCTGGAGACATATGCAACTTGGTGGGTTGCCTCCTGGAACCAGCAACGTTGCCTACACAGTTTTACACAGCCCTGCTTTATGCAAGCACTACAGTCATATTACTGCTGCAAATCGCATACTATGACCACATTCTCATATGGTACAAACGTCGCCAGCATGTTAACAACAAATGGGCTATTGAAGAAGAGAAAAGACCCTTGAAACCAAAACCAAGTCAAGAACATTCTGCGATTGCAATACCCAATGACACACACAAATCAGCATCTCCAAGGGAGTATTACTATATGTCAGCAAGATCGTTGGCCGGGAGCGCGACTCCACCATCGCTTACTTACATAAGAGCTGCTAAAAGTGATCCTCCAGCCATGGAATTCATTCACGACTCTTCTGATGATGAAGCATCTTCTAACATCTCTACAACTCAGCCTAGGCCCATACTACCACGTTCTGTAGATGGTCGTTTTGGAACATTTCTAGCTACAGCCATTAATTTACCCTTGAAGGGTAATGCTATGACTATGAGATATGGATACATAGGATTTACAGGAATAAAGCTCTTCCAGGAAAATGAAAATGAGATACATAGTAAATATGGACAATATTTGGGATGGGTCATGGCTGCTATCTATACATGTAGTCGTATTCCTCAAATTTGGTTGAATATTAAAAGAGGTAGTGTGGAGGGCTTAAATCCTTTCATGTTCGTCTTTGCACTGATTGCTAATGTCTCTTATGTGGGAAGTATTCTTGTACGAACAACAGAATATGAAAGCATCAAAGCTAATATGCCATGGTTGTTGGATGCAACAGTTTGTGTGGCACTAGACATTTTTATAATATCACAGTACATTTACTATAGATACTTTCGCAACAGAGAAGCAAAAAGTGATGATGGAGAAAGCTTGAAGTAG 1131 0.4032 MAPSYCVNENKECVKWVETYFKDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRTKSSHGVSLAFLLTWVAGDICNLVGCLLEPATLPTQFYTALLYASTTVILLLQIAYYDHILIWYKRRQHVNNKWAIEEEKRPLKPKPSQEHSAIAIPNDTHKSASPREYYYMSARSLAGSATPPSLTYIRAAKSDPPAMEFIHDSSDDEASSNISTTQPRPILPRSVDGRFGTFLATAINLPLKGNAMTMRYGYIGFTGIKLFQENENEIHSKYGQYLGWVMAAIYTCSRIPQIWLNIKRGSVEGLNPFMFVFALIANVSYVGSILVRTTEYESIKANMPWLLDATVCVALDIFIISQYIYYRYFRNREAKSDDGESLK* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4126 376 Gene3D - 35 129 - -
Tpr4g4126 376 Gene3D - 271 372 - -
Tpr4g4126 376 PANTHER PQ-LOOP PROTEIN/TRANSMEMBRANE FAMILY PROTEIN 1 373 - -
Tpr4g4126 376 SMART ctns 285 316 IPR006603 -
Tpr4g4126 376 SMART ctns 46 77 IPR006603 -
Tpr4g4126 376 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 1 373 - -
Tpr4g4126 376 Pfam PQ loop repeat 272 325 IPR006603 -
Tpr4g4126 376 Pfam PQ loop repeat 32 88 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4126 Tpr-Chr4 48196243 48201256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4126 K23678 - gmx:100789634 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4126 4 48196243 48201256 Tpr4g4126 4 48196243 48201256 ECH
Tpr2g0934 2 11294490 11299742 Tpr4g4126 4 48196243 48201256 PCT