Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g4072 ATGGCGCAGTGGTGGCGCTCCGCCGTCAACCACCTCCGATCAACGGAGGTAAATCATAGCTCATTATCCTCACTCCGTCGTAGTCATTCTTACCACACTATCCAAGCAATCCCGAGAGAAAGCACCGGCAGTAAAGTCGCCGCCAGAGACAGAATGCAAGGTCGAATTCCGGCCGTCGTTTTCTTCCAGAACCTTCTCGAAAAGAACCCTGAATCACGATGTTCTTCAAGGAAGCATTTGCTCACCGTCGAGAAGAAGCAGATTAAGGCAGTACTCAATTCGATTGAAGCTCCGTTCTTCTGTTCCACCCGTTTTCCGATTCAGATTCGTGCTGGTTCCGGATCTACTCATTTGCTTGAAAGTGGAACTGTTCTACCTATCAAGATTCATAGGGATGAAGAGAGTGGGAATATTTTGAATTTGGTGTTTGTTTGGGCTGAAGATGGTATGGATTTGAAGGTTGATGTGCCTGTTGTTTTCAAAGGTGAAGATGATTGTCCTGGTCTAAAGAAAGGTGGATTTTTGAATAAGATCAGAACTAGTCTAAGATATCTTGGTCCCTCTGAGCACATTCCTTCAAAAGTTGAGGTGGATATCAGCAACTTAGATATTGAAGATAGGATATTCATGCGTGATATTGAGGTTCATCCATCCTTGAAGCTTCTCAATAAGAATGAAAACATGCCCATATGTAAAATAGTTCCAACAAGTTTGGGAAACCAAGAACCAGTTGCTGCGTGA 741 0.4386 MAQWWRSAVNHLRSTEVNHSSLSSLRRSHSYHTIQAIPRESTGSKVAARDRMQGRIPAVVFFQNLLEKNPESRCSSRKHLLTVEKKQIKAVLNSIEAPFFCSTRFPIQIRAGSGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAEDGMDLKVDVPVVFKGEDDCPGLKKGGFLNKIRTSLRYLGPSEHIPSKVEVDISNLDIEDRIFMRDIEVHPSLKLLNKNENMPICKIVPTSLGNQEPVAA* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g4072 246 Gene3D Ribosomal protein L25, beta domain 150 228 IPR037121 -
Tpr4g4072 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 244 - -
Tpr4g4072 246 CDD Ribosomal_L25_TL5_CTC 33 92 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Tpr4g4072 246 Pfam Ribosomal protein TL5, C-terminal domain 152 236 IPR020057 -
Tpr4g4072 246 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 1 244 - -
Tpr4g4072 246 SUPERFAMILY Ribosomal protein L25-like 38 235 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g4072 Tpr-Chr4 47511724 47514931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g4072 K02897 - gmx:100802599 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g4072 4 47511724 47514931 Tpr4g4072 4 47511724 47514931 ECH