Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3882 ATGGGTTCTAAAAATGCCGCACCGGGCAGCAGAGCACGGAGGCCTTTGTCAATTTTTGCTGTGCTTGCTCTGTGCTGTTTGTTTTATCTTTTGGGAGCATGGCAAAGAAGTGGTTATGGAAAGGGAGATAGCCTTGCACTAAAGGTAAATAAGATACAGGCAGACTGCAACATTGTACCGAGTTTGAGTTTTGAACCCCATCACAAATATGTAGAAAATGTTGAACCATCCGAACCAAAAGCTAAAATGTTCAAGGCGTGTGATGTAAAATATGCTGATTATACACCTTGCCATGAGCAAGACCGAGCAATGAAATTCCCGAGAGAAAACATGATCTATAGGGAAAGACATTGTCCACCTGAAAATGAAAAATTGCATTGCCTCATTCCTGCACCCGAGGGATACACATCTCCTTTTCCTTGGCCTAAAAGCCGTGATTATGCCTATTATGCTAATGTTCCTTACAAGCATTTGACAGTGGAGAAGGCTGTTCAACACTGGGTCGAATTCCAGGGAAATGTGTTCAAATTTCCAGGTGGAGGAACCATGTTCCCTCAAGGAGCAGATGCATATATTGATGAACTTGCATCGGTTATTCCAATAGCAGATGGTACGGTCAGAACAGCGTTGGACACTGGTTGCGGAGTTGCAAGCTGGGGAGCATACTTGCTAAAGAGAAATGTGATAGCTATGTCTTTTGCGCCAAAGGATAACCATGAAGCACAAGTTCAGTTTGCACTGGAACGAGGGGTACCTGCTATAATTGGGGTTCTTGGTTCAATCCGTCTTCCATTCCCATCAAGATCCTTTGATATGGCTCAGTGTTCTCGATGTCTAATACAATGGGCTTCAAATGAGGGCATGTATCTAATGGAAGTTGACCGAGTTTTAAGGCCTGGTGGATATTGGATTTTGTCTGGCCCTCCAATTAATTGGAAAACATACTACCAAACATGGAAGCGGACCAAGGAGGATGTGAAGGCAGAGCAGAAAAGAATTGAGGATTTAGCTGAAAGTCTTTGCTGGGAAAAGAAGTATGAAAAGGGCGATATTGCCATCTGGAGGAAGAAAATAAATGCTAAATCCTGTCAAAGAAAGTCTCCCGATTTATGTGATTCAGATAATGCTGATGATGTATGGTACAAAAAAATGGAGGCATGCAAAACCCCGATCCCTGAGGTAACAAGCCAAAATGAAGTTGCTGGAGGTGAACTGAAGAAGTTTCCTGCTAGGCTTTTTGCAATTCCTCCTCGAATAGCCAAGGGTTTTATTCCAGGTGTAACAGTTGAATCCTATCAAGAGGACAACAAATTATGGAAACAACGTGTTAATAATTACAAAAGAATTAATAGATTGATTGGTACCACTAGATATCGGAATGTGATGGACATGAATGCGGGCCTTGGAGGATTTGCAGCAGCACTTGAATCACAAAAATCTTGGGTGATGAATGTTGTGCCAACAATTGCTGATAACACTTTAGGTGTTGTCTATGAACGAGGTCTCATTGGTATTTATCATGACTGGTGTGAAGGCTTTTCTACATACCCAAGGACATATGATCTTATTCATGCTAGTGGTTTATTTAGTTTGTACGAGGACAAGTGCAACCTAGAAGACATCCTTTTAGAAATGGATCGCATACTAAGGCCCGAAGGATCGGTCATAATACGCGATGAAGTTGATGTCCTTAACAAGGTTAAGAAAATTGTTGGAGGAATGAGATGGGAAGCTAAAATGATGGATCACGAGGACGGCCCGTTTGTACCCAAGAAGATATTGGTTATTATGAAAGAGTATTGGGTTGGCAGAAGTAAAAACGACACATCCAGCTAG 1836 0.4199 MGSKNAAPGSRARRPLSIFAVLALCCLFYLLGAWQRSGYGKGDSLALKVNKIQADCNIVPSLSFEPHHKYVENVEPSEPKAKMFKACDVKYADYTPCHEQDRAMKFPRENMIYRERHCPPENEKLHCLIPAPEGYTSPFPWPKSRDYAYYANVPYKHLTVEKAVQHWVEFQGNVFKFPGGGTMFPQGADAYIDELASVIPIADGTVRTALDTGCGVASWGAYLLKRNVIAMSFAPKDNHEAQVQFALERGVPAIIGVLGSIRLPFPSRSFDMAQCSRCLIQWASNEGMYLMEVDRVLRPGGYWILSGPPINWKTYYQTWKRTKEDVKAEQKRIEDLAESLCWEKKYEKGDIAIWRKKINAKSCQRKSPDLCDSDNADDVWYKKMEACKTPIPEVTSQNEVAGGELKKFPARLFAIPPRIAKGFIPGVTVESYQEDNKLWKQRVNNYKRINRLIGTTRYRNVMDMNAGLGGFAAALESQKSWVMNVVPTIADNTLGVVYERGLIGIYHDWCEGFSTYPRTYDLIHASGLFSLYEDKCNLEDILLEMDRILRPEGSVIIRDEVDVLNKVKKIVGGMRWEAKMMDHEDGPFVPKKILVIMKEYWVGRSKNDTSS* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3882 611 Coils Coil 429 449 - -
Tpr4g3882 611 PANTHER METHYLTRANSFERASE PMT14-RELATED 5 605 - -
Tpr4g3882 611 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 5 605 IPR004159 GO:0008168
Tpr4g3882 611 Gene3D Vaccinia Virus protein VP39 159 367 IPR029063 -
Tpr4g3882 611 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 93 598 IPR004159 GO:0008168
Tpr4g3882 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 321 IPR029063 -
Tpr4g3882 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 443 594 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3882 Tpr-Chr4 44988887 44993705 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3882 - - mtr:MTR_4g098890 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3882 4 44988887 44993705 Tpr4g3882 4 44988887 44993705 ECH