Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3872 ATGGAAAAACTTAGAAGCATGAAGTTCCTCATATACATAGTTTTTTCTCTTCTTTTTCTTTCTCAACACTCAAATGGTTATGGCTCCAATCTTATCCTTCAATCTTGTAGGGATGCCTCTAATAATGACCCAAATTTGAGCTATGATTTTTGTGTTACATCCCTCAATGAAGCTTGCAAGAACAAATCACAACCTACCAAACTTGAAGATCTTGTGAACATATCAATTCAGCTAACCAAGTCCAATGGAACCAAAATCATTTCCATAATTTCAAAGCAGTTGCAAAACCAAACTCAAGATGAATATGTCAAATCATGTTTACAAGATTGTTTTGATCTTTACAATGATTCACTTTCATCTTTAGATGATGCTTTGGTTGCTTTCAATAAATCAAAGGATTTGGACACGGCCGGTATAAACGTTAGCGCCGCCTTAGATGATTCGGTTACATGTGAAGATCAATTCAAAGAAAGGAAAGAGAAAAATGAAACTTCTCCTTTAACAAAAGAGAATCGTGTTTACTTTCAACTCAACGTCATATCTCTATCTTTTATTCAAATGATTCATCAACATAACTAG 579 0.3385 MEKLRSMKFLIYIVFSLLFLSQHSNGYGSNLILQSCRDASNNDPNLSYDFCVTSLNEACKNKSQPTKLEDLVNISIQLTKSNGTKIISIISKQLQNQTQDEYVKSCLQDCFDLYNDSLSSLDDALVAFNKSKDLDTAGINVSAALDDSVTCEDQFKERKEKNETSPLTKENRVYFQLNVISLSFIQMIHQHN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3872 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 188 IPR035513 -
Tpr4g3872 192 CDD PMEI-Pla_a_1_like 36 187 IPR034088 -
Tpr4g3872 192 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 189 IPR006501 GO:0004857
Tpr4g3872 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 188 IPR035513 -
Tpr4g3872 192 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 16 188 - -
Tpr4g3872 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 188 - -
Tpr4g3872 192 Pfam Plant invertase/pectin methylesterase inhibitor 31 182 IPR006501 GO:0004857
Tpr4g3872 192 SMART PMEI_2 27 184 IPR006501 GO:0004857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3872 - - gmx:100817110 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3872 4 44926291 44927445 Tpr4g3872 4 44926291 44927445 ECH