Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3866 ATGGAAGGTCTGATTAAGGGCTTGCTCGACGTAGCTCTCGGCAACGATCACAACAATCAGGATGATGATGATCGTCAATCACGCGACGAACGTTCCAGATCTTCTTGGGCGGAGGTTGTTTCCGGAGATCAAGATGCATCCGATCACCGTAATCCTCACTCTCAAAATCAGCGGAAAGAGGAGGAGTGGCAATCCGAACAAGGTTCTACAATTTCCAACAGACCTCACAACTACAAGAAAGAGGAAGCAGAACCATGGCAAGACAGTAGTAACCGTCACAGTCCTCGGCCTCAAAAGTCAGATAACAACGATGGATGGCAGACTGTGGGCAAACCTTCAAGACAGACACACAAGGTTCCAAAGGATAACTGGAACAGCTATAAACGTCCTGCTGATGAGCAACAATACTCCAATGACGTTGAAGTTGGTGCTAGGGTGGAGCCATCACAAGATGAACTGGCTGATCTGTCACGAGCTTGTGAAAAACTCTGGGATCTGGATTTAAACCGTTTGGTACCTGGCAAGGACTATGAAATTGACTGTGGTGAAGGGAAAAAAGTTTACCAAAAGCAAGATATGGCACAGGGGAGCTTGTTTACATGGGTTAGTGATGATGTATTCAGAAAGCCCACTTATGCTCGATTTCTTTCGCTGTTAGATAATTACAACCCACATCAAGGATCTAAGGAGGTTGTGACATCTGAAGAGAAACAAGAGCAAGCTTCCTTCATAGAAGAAATTAGTAGAACAGCACCGATTAAATATCTTCACAAGTTTCTTGTATCCAAAGGAATCACGTCAGGGAGTTTACAAGATTTCAAAAGATTGTTGACCAGTTTGTGGTTTGATCTTTATAGCCGCTGTGGAACTTCTGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAAAGCAGTGAAGTTTCTGGATTTCATAACTGGCTGCAGTTTTACCTTGAAGAAGTGAAGGGAAATATTGATTATCAAGGCTATATTTTTCCCCGTCGACGAGGTTCAATTGCTGACTCTGAAACCCAGCTTCTGACCATTCAGTTTGAATGGAATGGTGTTCTGAAATCGGTATCAAGCACATTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTTCGTCGGTCAGGAAGATAACCACATTCAGATTGGTCCATATGCAGTTAATATCAAGTGTTATCGTTTAGGCAACCAAATTGGATCTGTTTTCCCTATTGCGGATTCATGA 1263 0.4291 MEGLIKGLLDVALGNDHNNQDDDDRQSRDERSRSSWAEVVSGDQDASDHRNPHSQNQRKEEEWQSEQGSTISNRPHNYKKEEAEPWQDSSNRHSPRPQKSDNNDGWQTVGKPSRQTHKVPKDNWNSYKRPADEQQYSNDVEVGARVEPSQDELADLSRACEKLWDLDLNRLVPGKDYEIDCGEGKKVYQKQDMAQGSLFTWVSDDVFRKPTYARFLSLLDNYNPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKFLVSKGITSGSLQDFKRLLTSLWFDLYSRCGTSGSSSAFEHVFVGEIKQSSEVSGFHNWLQFYLEEVKGNIDYQGYIFPRRRGSIADSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFVGQEDNHIQIGPYAVNIKCYRLGNQIGSVFPIADS* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3866 420 MobiDBLite consensus disorder prediction 75 99 - -
Tpr4g3866 420 MobiDBLite consensus disorder prediction 1 137 - -
Tpr4g3866 420 PANTHER - 19 419 - -
Tpr4g3866 420 CDD XendoU 152 416 IPR018998 GO:0004521
Tpr4g3866 420 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 152 420 IPR018998 GO:0004521
Tpr4g3866 420 SUPERFAMILY EndoU-like 154 418 IPR037227 -
Tpr4g3866 420 MobiDBLite consensus disorder prediction 100 114 - -
Tpr4g3866 420 Pfam Endoribonuclease XendoU 155 416 IPR018998 GO:0004521
Tpr4g3866 420 PANTHER PLACENTAL PROTEIN 11-RELATED 19 419 IPR039787 GO:0004521
Tpr4g3866 420 MobiDBLite consensus disorder prediction 16 36 - -
Tpr4g3866 420 MobiDBLite consensus disorder prediction 43 65 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3866 K14648 - gmx:100813919 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3866 4 44813565 44818332 Tpr4g3866 4 44813565 44818332 ECH