Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3777 ATGTTGAATATGGCTATGGTGGTGATCACAGCAACTCTTCTGATCTTCCTCTTGTGCTCTCCCTCAGGAGCTATATTACTGAACAAGCTTCAGCTACCATCACCAGTGACTGGACCGGAGTCACTTGCATTCGATAGAAACAACGGAGGACCATATGTTAGTTCCTCGGATGGAAGAATTTTCAAATATGTTGGTCCAAATGAAGGATTCAAAGAATATGCTTCCACTTCTCTAAACAGGAACAAGACAGTCTGTGATGGGCTAGCAGACTTCTCAGCAGTCCAGGCAACATGTGGACGACCTTTAGGATTGGGTTTCAATCATCAGACAGGCGATTTGTATGTAGCCGATGCTTATTTTGGACTTGTTAAGGTTTCTCCTGATGGAGGCAATGTAACTCAATTAGTTGGACCTGCACAAGGCAATTCTACTAGGTTTACTAATGGTTTGGATGTAGATCCTGACACTGGAATGGTTTATTTTACCGAAGCTAGCACTAACTTCCAGCTCAAAGATTTCCAGACATTGCTAAACAGCGGAGATAATTCAGGAAGCCTGCTGAAATATGATCCAAGCACCAACCAAACGACGGTGTTGTTAAGTAATCTTGCAGTGCCATCTGGTGTAGCAGTTAGCAGAGACGGCTCATTTGTTCTTGTTGGTGAATATCTGGCAAACAGAATTCAAAGAGTGTGGCTGAAAGGACCAAGAGCGAATTCGTCAGAACTATTCATGCTACTTCTTGGAAGACCAGATAACATCAAGAGAAATTCAAGAGGACAGTTTTGGATTTCAGTGAATAGTTTTATTGGGTCACCAAGATCTCCAAGGCGTTCGATTTTGCCTGCCGGAGTCAGAGTGACGGAGAATGGTTTAATTTTACAGGTTGTGTCTCTTGCATCTGAGTATGGTACTGATGCAGCTAGTGAGGTTCAAGAGTATAATGGAACACTCTATAGTGGCTCCCTGCTTGCTTCTTATGCTACCATTTTTACTCCTTAG 1002 0.4291 MLNMAMVVITATLLIFLLCSPSGAILLNKLQLPSPVTGPESLAFDRNNGGPYVSSSDGRIFKYVGPNEGFKEYASTSLNRNKTVCDGLADFSAVQATCGRPLGLGFNHQTGDLYVADAYFGLVKVSPDGGNVTQLVGPAQGNSTRFTNGLDVDPDTGMVYFTEASTNFQLKDFQTLLNSGDNSGSLLKYDPSTNQTTVLLSNLAVPSGVAVSRDGSFVLVGEYLANRIQRVWLKGPRANSSELFMLLLGRPDNIKRNSRGQFWISVNSFIGSPRSPRRSILPAGVRVTENGLILQVVSLASEYGTDAASEVQEYNGTLYSGSLLASYATIFTP* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3777 333 Gene3D - 21 332 IPR011042 -
Tpr4g3777 333 Pfam Strictosidine synthase 148 236 IPR018119 GO:0009058|GO:0016844
Tpr4g3777 333 SUPERFAMILY Calcium-dependent phosphotriesterase 29 302 - -
Tpr4g3777 333 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 6 331 - -
Tpr4g3777 333 PANTHER STRICTOSIDINE SYNTHASE-RELATED 6 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3777 Tpr-Chr4 43670321 43671604 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3777 - K01757 lja:Lj0g3v0322739.1 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3777 4 43670321 43671604 Tpr4g3777 4 43670321 43671604 ECH