Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3776 ATGTTGAACATCAATAATACTATGGTGATGATTGTCACTGCCATTCTTGCTATGTTTCTACTGTGTTCACCATCATCAGTAGCTGTATTACTGAACAAGCTTCAGCTACCAGCACCACTGACAGGACCTGAGGCACTAGCATTTGATAGAAATGGTGGAGGGCCTTATGTTAGTTCTTCTGATGGAAGAATTTTCAAATATGTTGGTCCAAGTGAAGGCTTCAAGGAATATGCTTACACTACTCCCAACAGGAACAGAACAATCTGTGATGGACTAGCTGATTTCTCAGTAGTTCAAGCAATATGTGGAAGGCCTTTAGGATTGGGATTCAATCATCAGACAGGCGATTTGTATGCAGCTGATGCTTATTTTGGACTTGTTAAGATTGGTCCCAATGGTGGTGGGAATGTAACCCAATTAACTGCACCTGCACAAGGCAATTCTACTAGATTTGCTGATGGTTTGGATGTAGACCCAGACACTGGAATCGTTTATTATACCATAGCTAGCACTACTTACCAGCTCAAAGATTTCCAGAAAGTGGTAAGCAGTGGCAGTGCAGATAATTCAGGAAGCCTGTTGAGATATGATCCAAGCACCAACCAAACAACAGTGTTGCTAAGCAATCTTACAATACCATCTGGGGTGGCTGTAAGCATAAATGGCTCATTTGTACTTGTTAGTGAATATCTAACAAATAGAATTCAGAGAGTGTGGTTAAAAGGACCAAGAGCAAATTCATCAGAATTATTCATGCAACTTGCTGGAAGGCCAGATAACATCAAGAGGAATTCAAGAGGCCAATTTTGGATTTCAGTGAATAGTTTTTTTGGCTCACCAAGATCTCCAGGATGTTCTACTTTGCCTACAGGTGTTAGAGTGACTGAGAATGGTTTAGTTTTACAAATTGTATCCCTTGCTGAAGAGTATGGTGCCGAAGCAGCTAGTGAGGTTCAAGAGTACAATGGAACACTCTATGGTGGCTCTCTACTTGCTTCTTATGCTACCATTTTTACTCCCTAG 1023 0.4106 MLNINNTMVMIVTAILAMFLLCSPSSVAVLLNKLQLPAPLTGPEALAFDRNGGGPYVSSSDGRIFKYVGPSEGFKEYAYTTPNRNRTICDGLADFSVVQAICGRPLGLGFNHQTGDLYAADAYFGLVKIGPNGGGNVTQLTAPAQGNSTRFADGLDVDPDTGIVYYTIASTTYQLKDFQKVVSSGSADNSGSLLRYDPSTNQTTVLLSNLTIPSGVAVSINGSFVLVSEYLTNRIQRVWLKGPRANSSELFMQLAGRPDNIKRNSRGQFWISVNSFFGSPRSPGCSTLPTGVRVTENGLVLQIVSLAEEYGAEAASEVQEYNGTLYGGSLLASYATIFTP* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3776 340 Gene3D - 25 339 IPR011042 -
Tpr4g3776 340 Pfam Strictosidine synthase-like, N-terminal 34 66 - -
Tpr4g3776 340 Pfam Strictosidine synthase 153 243 IPR018119 GO:0009058|GO:0016844
Tpr4g3776 340 PANTHER SMP-30/GLUCONOLACONASE/LRE-LIKE REGION PROTEIN 8 338 - -
Tpr4g3776 340 SUPERFAMILY Calcium-dependent phosphotriesterase 33 294 - -
Tpr4g3776 340 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3776 Tpr-Chr4 43666357 43667997 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3776 - K01757 mtr:MTR_4g112620 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3776 4 43666357 43667997 Tpr4g3776 4 43666357 43667997 ECH