Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3765 ATGGATTCGGATGAAGAAGATTTTGTTTTCTTCGGAACGCCGATTGAGCGCGAGGAAGATTCAATCAGCCGTAAAAAGAAAGCCATTGCTGAATCCTCCGGTCAACTCCGAACACTCCCTGCTTGGAAGCAAGAGGTTAGAGATGATGAAGGGAGGAGAAGATTCCACGGCGCATTTACAGGCGGTTATTCTGCTGGTTACTATAATACAGTGGGTTCAAAGGAAGGTATAAGTTTATGTTGGAATTATAATGCTCCTGTTATGGATTTGATTATCAATCGGCATGCGGTGAGTGTTAACTTTAAAAATGAATGTGTAGGATGGGCACCGCAAACTTTTGTATCGTCCAGGAAGAGCAGAGCTGAATTCAAAGAGCAGAACATATTGAATTTTCTAGATGACGATGAGAAAGCTGATCTGGAAGGTCGGTTTTTGGGGACATCTTCACAGTTTGACACATTTGGTTCCACAGCTGCTGAAATTGCTCGCAAACAAGCTGAGAAGGAACAAAAACAGAGGCCATCCATAATTCCTGGACCTGCTCCCGACGAATTAGTTATTCCAGCCACAGAGTCTGTAGGGGTAAAACTGCTGTTGAAAATGGGATGGAGTCGTGGTCGCTCAATTAAGGATTCACATACCGATGCACTCTACGATGCTAGAAGACAGGCTCGGAGAGCTTTCATAGCATTTTCTACAGATGATACAAAAGTGAAGGTTACTGAGTCTGAGCGTACCAAGGATGATATTCAAAACTTCCCTGAGCAGTCTGTGAATGATGATGCTCAGTCTTCTAAGATCACACCGGTTTACGTACTCAACTCAAAGCAAGACCTGTATGGATTAGGTTTTGATCCTTACAAGCATGCTCCTGAGTTTAGAGAGATGAAAAGGTCACGCCTATCCAGCAAAACGGGACCTGGGCACAGCAAAAACTTTTCCACAAGAGACAGTCTTTTTGGTTTAAAGTCAGGAAAGGCTGCTCCTGGTTTTGGCATTGGTGCACTTGAGGAACTTGGTGCTGAAGATGAGGATGTCTATGCCACCGGTTATGAATTTGAAGAGACTTATGTTCAAGAAGAGGGTGAGGAGCCTTCAGTGTTGACCTTAGAAAATCCGAAAAAGAAAGATCAGAAGGAGCATGGTAATCTGCCTGGTTTTAAAGTGACATCCAATTCCGACTATAAAATGGAAAGATTTGAGGCTCCTCTGATTCCTAAGGATTTTGTGCCCCACCATGCATTTTCTGGACCTCGTGAGATTAACCGCCAGAACTATGAGGTCCCTCCACCAGATGTTCCTCCTCCTGAGGATAGCAATTTAAAACTATTAATTGAGGGGGTTGCAAATCTGGTGGCTAAATGTGGTAAATTATATGAGGATCTATCTAGAGAAAAAAACCGGTCAAATCAATTGTTTAACTTCCTTTCTGGAGGAACTGGCCACGATTATTATGCAAGGAAACTGTGGGAGGCACAACAGAAATGCAATGACCAAACTAGGGTGCAGTTGGATGGAAAAATGCCTCCTGGTGTGCAAAGGCTGACAGCTGAGAGTCGAGGTCAGATCTTAGGGGAAAAACCTCTGGAGAAAACCTTTGAAGATGCATCCTCATCTGTTTCTTCTAAAGATATTCAGCTCCAATATAATCTTGTAGATACATTTACCAAGTCTGAATCATTTAGTGAGTTATCAGAATTTGAAAAGCCTTTCAAGGATGATCCTGCAAAGCAAGAAAGGTTTGAGCAGTTTATCAAGGCGAAGTATAAAGGTGGATTACGCTCTGGAAGTTCGAGTTTAGCTGGAAATATGTCAGAAGCTGCTCGTGCTCAAGAGAGACTATCTTTTGAAGCTGCAGCTGATGCAATAGAAAAGCGAAAACAGAGCAGAGGAAGCAAGTTTTCAACTCCATCTTCCATGGATTTCATCCCAGGTGGTGTAATGGAGTTTACATCTGGTACAGTAGAGCCAACAAAAGACCAGCCAGTTGTAGATTTTAAGGAGAAGAAATTGTGCCCAAAGAGAGAAGAGTTTCAATGGCGTCCTTCACCTCTTCTCTGCAAACGCTTTGATCTTGTTGATCCTTATATGGGGAAGCCTGCACCTGCTCCACGGATTAGGAGTAAGATGGATACATTGATTTTTACTTCAGATTCAGTGAAGGGTACTAAAGTTGAAGAGCCTGTTACTGCAAAGAAAGACATCTCAGTCTTGCAACAACCTGCTAATAAAGACATAACTAAAAGTATTGCTGAAAATGGAACTGAAGAGGAAGTGGAAGTTGAAAATATTGAAAGGCCGGTTGACCTATACAAGGCAATTTTCTCTGATGATTCAGATGATGAAGTGGAAGACAATAATATTATGAAAGTGGAGAATCAAGAAAAAAAAGCTGAAGTAGCTAACAATACATTGAGCCGTTTGAGGGCTGGTGACTTTCTGAAATCTTTGGGAAAGGAACTAGGGATTGAGGTTCCTCCTGATACACCTTACCCTACGCAAAAGTCAGGCAAAGATGCTCCCCAGAGAGAAACTGTTGATGAATATGCAAAACCTGACATCATGAATGGTGAAAACAACATGGTGTCATTGAAACATGATTTGCCACAGGATCAGGGTGGACCCTCAAAAGATGACACCGGTTATGGGCATATGCTTGATAATCGTAACATTAAAACCAAGGGAACTAGTATCTCTGATGGTAAATCAAAATCAAGTAAGTCTAATGGGGAGAAGTATGAAGATGATAGGAAAGTTAAATCACCTTTAGTCAGCAACCAAAACCATCGCAGCAGCTCAGAGGAGGACAGGAGCAGAAAGCGCTCTATTAAGTTAGATAGGGAAAAATATGACAGGTACAAGAAAACTAAAACACCATCAACACACCGCCTAGATTATAGAAGTAGTTCTTCATCGGAAGAGGATAGGAGCAGAAAACGCTCCAGGCATCATCGACATAGGAGGCACGATGTAGAAAGTGATTCTTCCAGTGACGATGAAAGAGATCGACGCAGTTCAAGGTCAAAAGGGAGACGGGAAAAGTCTTCTCGAGAAAAAAGCAATGGAAGTAAAAAACACTCAAAACATCACAAGCACGGAAAGCATGAATCTCCAAGTAGATCCTCTCATTATAGGGTGGATAAGGAAGATTCGTATTCCAGAAAAGAGAAAAGACGGAGGGAATGA 3186 0.4215 MDSDEEDFVFFGTPIEREEDSISRKKKAIAESSGQLRTLPAWKQEVRDDEGRRRFHGAFTGGYSAGYYNTVGSKEGISLCWNYNAPVMDLIINRHAVSVNFKNECVGWAPQTFVSSRKSRAEFKEQNILNFLDDDEKADLEGRFLGTSSQFDTFGSTAAEIARKQAEKEQKQRPSIIPGPAPDELVIPATESVGVKLLLKMGWSRGRSIKDSHTDALYDARRQARRAFIAFSTDDTKVKVTESERTKDDIQNFPEQSVNDDAQSSKITPVYVLNSKQDLYGLGFDPYKHAPEFREMKRSRLSSKTGPGHSKNFSTRDSLFGLKSGKAAPGFGIGALEELGAEDEDVYATGYEFEETYVQEEGEEPSVLTLENPKKKDQKEHGNLPGFKVTSNSDYKMERFEAPLIPKDFVPHHAFSGPREINRQNYEVPPPDVPPPEDSNLKLLIEGVANLVAKCGKLYEDLSREKNRSNQLFNFLSGGTGHDYYARKLWEAQQKCNDQTRVQLDGKMPPGVQRLTAESRGQILGEKPLEKTFEDASSSVSSKDIQLQYNLVDTFTKSESFSELSEFEKPFKDDPAKQERFEQFIKAKYKGGLRSGSSSLAGNMSEAARAQERLSFEAAADAIEKRKQSRGSKFSTPSSMDFIPGGVMEFTSGTVEPTKDQPVVDFKEKKLCPKREEFQWRPSPLLCKRFDLVDPYMGKPAPAPRIRSKMDTLIFTSDSVKGTKVEEPVTAKKDISVLQQPANKDITKSIAENGTEEEVEVENIERPVDLYKAIFSDDSDDEVEDNNIMKVENQEKKAEVANNTLSRLRAGDFLKSLGKELGIEVPPDTPYPTQKSGKDAPQRETVDEYAKPDIMNGENNMVSLKHDLPQDQGGPSKDDTGYGHMLDNRNIKTKGTSISDGKSKSSKSNGEKYEDDRKVKSPLVSNQNHRSSSEEDRSRKRSIKLDREKYDRYKKTKTPSTHRLDYRSSSSSEEDRSRKRSRHHRHRRHDVESDSSSDDERDRRSSRSKGRREKSSREKSNGSKKHSKHHKHGKHESPSRSSHYRVDKEDSYSRKEKRRRE* 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 1039 1061 - -
Tpr4g3765 1061 ProSiteProfiles SURP motif repeat profile. 444 488 IPR000061 GO:0003723|GO:0006396
Tpr4g3765 1061 Gene3D Surp module 405 498 IPR035967 GO:0003723|GO:0006396
Tpr4g3765 1061 SUPERFAMILY Surp module (SWAP domain) 426 494 IPR035967 GO:0003723|GO:0006396
Tpr4g3765 1061 PANTHER BNACNNG56020D PROTEIN 934 1060 - -
Tpr4g3765 1061 PANTHER BNACNNG56020D PROTEIN 1 78 - -
Tpr4g3765 1061 PANTHER BNACNNG56020D PROTEIN 103 956 - -
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 988 1020 - -
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 930 978 - -
Tpr4g3765 1061 SMART surpneu2 442 494 IPR000061 GO:0003723|GO:0006396
Tpr4g3765 1061 Pfam Surp module 444 491 IPR000061 GO:0003723|GO:0006396
Tpr4g3765 1061 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 934 1060 - -
Tpr4g3765 1061 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 1 78 - -
Tpr4g3765 1061 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 1 103 956 - -
Tpr4g3765 1061 Coils Coil 791 811 - -
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 1021 1038 - -
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 905 923 - -
Tpr4g3765 1061 Pfam Protein of unknown function (DUF1604) 39 77 IPR011666 GO:0006397
Tpr4g3765 1061 Pfam Protein of unknown function (DUF1604) 107 147 IPR011666 GO:0006397
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 890 904 - -
Tpr4g3765 1061 MobiDBLite consensus disorder prediction 821 1061 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3765 K13123 - gmx:100796934 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3765 4 43565843 43574595 Tpr4g3765 4 43565843 43574595 ECH