Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3750 ATGAATTCCCAATTTCCATTTTCAAACATGGATCCTGTAAACATTGGACTTGGTTGTTCAGAAAAGACAATTCCTGTTACTTCTTCTTCAATCAAGCCAAAAAAGAAAACAATGACTTCAGTTTATTTGAAGTTTTTTGAGACTGCTACTGATGGCAAGACTAGGAGATGCAAGTTTTGTGGACAGACCTATTCCATTGCAACTGCCACAGGCAATTTGGGTAGGCATCTTGCTAATCGCCATCCGGGCTACGATAAAGAAGGGGAAGCTGTAAGCAATTTGGTAACTCGGCCCAATGGCGTTGTGATCAAGAAATTTCAGGCTCGAGGAAAATCAAACCAGGTGGATTATGATCATCTAAATTGGTTACTTGTTAGGTGGCTTGTTTTAGCTTCTCTCCCTCCTTCAACTCTAGAAGAAAAGTGGCTTGTAAATTCTTACAAGTTTCTAAACCCGTCTATACAAATTTGGCCTAGTGACAAGTACAGAACTGTACTTGATGAAGTTTTCAGTAGCATGAGGGAAGATGTAAGAGCATTGTTAGAACAGGTTTCTTTTAAGTTCTCCATCACACTTGATTTCTGGACTTCCTTTGAACAGAACTTCTATATGAGTGTAACATGTCAGTGGATTGATGAAGACTGGTGCTTCGAGAAGTTGCTTCTTGACGTCTGTCGCATACCATATCCATGTGGGGGTGCAGAAATCTATCGTTGCCTCATAAAAGTTCTTAAGTTTTACAATATTGAAAGCAGAATCCTGTCATGTACCCACGATAATAGTTCAAGTGCCATGCATGCTTGCCATACTTTGAAAGAGGACTTCGATGGTCAGAAAATAGGACCATTCTGTTATATACCTTGCGCTGCTCAAACTTTGAACCTGATAATAGATGATGGGTTGAGATCTGGAAAACAAGTAATTTCAAAGATCAGAGAATTTGCAATGGAGTTAAATGCATCACCGGTAATCTCTGACGATTTTATTCAAATTTCTACCGCTTATCAAGAAGGTACTTGGAAATTTCCTCTTGATGTTTCAGCAAGGTGGAGTGGAAACTACCAAATGCTTGATCTTGTTCGTAAGGCTGGTAAATCAGTGGATGCGATTATTCGTAAATATGAAGAGACACTAGGCCGTAGGATACTGCTGAGTCCTTCTGATAAAAGTGTCGTTAACATCATGCATCAATATCTCGAGCCATTCTACAAGACCACAAACGACATCTGCACAAGCAAGGTGCCAACGATTGGGCTTGTCCTTTTCTTCATGGATCACATCTCAGAAACAATTGCTACCTGCAAAGAATCACGTCCCAGTCCAGAATGGCTAAAAAGTGCCGCAGAAGAAATGGCTAAAAAGGCTAGAAATTATACTAATCAGGTTTGCAACATATTTACATATATGACAGCTATTCTAGATCCTCGAATAAAGGGAGATTTGATCCCGGATAGTTTAAACTCGCAAAGTTATCTGGAGGAAGCAAGGTCACATTTTATAAGAAACTATTCTATTAACCATTTCTCCTCACTAAGTTCTGGTTACAATGGACAAGAAATTGAAGATGGAGGAAATGTTTCCTTTGCCGAGGAAATAGCTCGCAAAAAACGTAGGACAAACATGAGCTCTGCCACTGATGAGCTTACACAGTACTTGTCAGAGGCTCCAGCTCCAATAGCAACGGATGTTCTGGAGTGGTGGAAGGTAAACAGTACACGCTACCCTCGATTGTCTGTGATGGCTAGAGATTTCTTGGCTGTGCAAGCAACCTCAGTAGTGCCTGAGGAACTTTTCTGCGGCAAGGGTGATGAAATTGACAAGCAACGATTTTGTATGCAGAATGATAGCACACAAGCTGTTCTTTGTATCAAGTCATGGATTCAGGTCGGAATCAAGTTTAAGTATAAATCGACGGAGATAGACTATGAGAGGTTGATGGAACTAGCAGCTGCTTCTGCAACACATAATAATAGCCTTTCAAATTCTGAGAAGAAGCAAAAATAG 2004 0.4032 MNSQFPFSNMDPVNIGLGCSEKTIPVTSSSIKPKKKTMTSVYLKFFETATDGKTRRCKFCGQTYSIATATGNLGRHLANRHPGYDKEGEAVSNLVTRPNGVVIKKFQARGKSNQVDYDHLNWLLVRWLVLASLPPSTLEEKWLVNSYKFLNPSIQIWPSDKYRTVLDEVFSSMREDVRALLEQVSFKFSITLDFWTSFEQNFYMSVTCQWIDEDWCFEKLLLDVCRIPYPCGGAEIYRCLIKVLKFYNIESRILSCTHDNSSSAMHACHTLKEDFDGQKIGPFCYIPCAAQTLNLIIDDGLRSGKQVISKIREFAMELNASPVISDDFIQISTAYQEGTWKFPLDVSARWSGNYQMLDLVRKAGKSVDAIIRKYEETLGRRILLSPSDKSVVNIMHQYLEPFYKTTNDICTSKVPTIGLVLFFMDHISETIATCKESRPSPEWLKSAAEEMAKKARNYTNQVCNIFTYMTAILDPRIKGDLIPDSLNSQSYLEEARSHFIRNYSINHFSSLSSGYNGQEIEDGGNVSFAEEIARKKRRTNMSSATDELTQYLSEAPAPIATDVLEWWKVNSTRYPRLSVMARDFLAVQATSVVPEELFCGKGDEIDKQRFCMQNDSTQAVLCIKSWIQVGIKFKYKSTEIDYERLMELAAASATHNNSLSNSEKKQK* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3750 667 SUPERFAMILY Ribonuclease H-like 174 629 IPR012337 -
Tpr4g3750 667 Pfam hAT family C-terminal dimerisation region 547 627 IPR008906 GO:0046983
Tpr4g3750 667 PANTHER BED ZINC FINGER AND HAT DIMERIZATION DOMAIN-CONTAINING PROTEIN 22 637 - -
Tpr4g3750 667 Pfam BED zinc finger 41 82 IPR003656 GO:0003677
Tpr4g3750 667 SMART bed5 37 84 - -
Tpr4g3750 667 Pfam Domain of unknown function (DUF4413) 410 490 IPR025525 GO:0003677
Tpr4g3750 667 PANTHER BED FINGER-RELATED 22 637 IPR045259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3750 Tpr-Chr4 43462104 43465529 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3750 - - qsu:111996967 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3750 4 43462104 43465529 Tpr4g3750 4 43462104 43465529 ECH