Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3740 ATGGTTGTTGTAGTTGTTGAAATGAATTCTGTAAAGAGTAGGGAAGCTGAGATAAGTGTTCACAATCAAGCTTATGAAGTTGGTGAGAGCTCGGTTTCAGATGCTAGTGATGAAGTTGCTGAGGCCAAGGTACAGCCTAATGCCCTGCAGAAAAGGGCCAGGTTGCAGAAGGAACTAACTTTTCAGGACTTGTATGAAAACCAAGAGCTGTTTGATGAGGATGATGACGAGGACGGTGATTGGGATCCGTCTCAGTTGCAGAAGTGTCTCGAAGTCATCAAGTGGTTGTGTAAAAATTGTACTGTGGATAACATAAACGATGATGTTTGTTGCAGAATATGTGGGGAGCATAAAGATTCTAAAATCCTGAGCCTTGGGCATTTTGCATCTCCCTTTGCACCAGATGAAGATCTCAATGAGATCCGGCCAACCATAAAAGGACTGAGAGATATTGACCCACTGGAATCTGCAGCAAACAGTTCTACGGCAATTGGCTTTGATGAAAGAATGTTGTTGCATGCAGAAGTTGAAATGAAACCGCATCCGCACCCTGAAAGGCCAGATCGACTTCGAGCAATTGCTGCCAGTCTTGCCAGAGCTGGTATATTTCCAGGAAGATGCTGTTCAATTCCTGCTAGAGAAATCACTCAAGAAGAACTTATGATGGTTCATTCTTCGGAGCATATTGAATCTGTGGAAGTTACAAGCAAGTTAATGTCTAGTTACTTCACTTCTGACACATACGCCAATGAGCATTCAGCATGTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTGGCATCGGCAATTGTTTCTGGACGTGCCAAAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCCGGTGTAAAAGATGTGATGGGGTTTTGCCTTCACAATAATGCTGCAGTGGCAGCATTGGCGGCTCAGGCTGCAGGGGCTAAGAAGGTGCTCATTTTAGATTGGGATGTTCATCATGGAAATGGCACACAGGAAATATTTGAGCAAAACAATTCAGTCTTGTATATATCATTGCATAGGCATGAGGGTGGAGCGTTTTATCCTGGTACTGGAGGTGCTCATGAGGTTGGTTATATGGGTGCAGAAGGTTTCTGTGTGAATATTCCGTGGAGTCGAGGTGGTGTTGGTGATAATGATTACATTTTTGCATTTCAGCATGTTGTACTTCCTATAGCTTCCGAATTTGCTCCAGATTTTACCATAATATCAGCAGGATTTGATGCTGCTAGAGGTGATCCCCTAGGAGGCTGTGATATTACTCCTTCTGGCTATGCACAGATGACACACATGTTGAATGCCCTTTCTGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCATCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGATAGTCATGTATGTGAACTGGAAAACAGTTTCCCTTCCAAATCTGGCCTGCAAACTGTTTTCGAAGTCCTCGACATTCAGAATAATTTTTGGCCTTCCTTGAAACCTATCTTTATGAATGTGATGTCACTTTGGAAAATGTACTGTCTTGGGAAAAAAAGCAAACCCACCAAAAAGAGACGCCGAGTTATACCACCGATGTGGTGGAGATGGGGTCGTAGAAGTTTCTTATTCCATATGCTGAACGGCCATCTTCGTGTAAAATCAAAATGA 1695 0.4324 MVVVVVEMNSVKSREAEISVHNQAYEVGESSVSDASDEVAEAKVQPNALQKRARLQKELTFQDLYENQELFDEDDDEDGDWDPSQLQKCLEVIKWLCKNCTVDNINDDVCCRICGEHKDSKILSLGHFASPFAPDEDLNEIRPTIKGLRDIDPLESAANSSTAIGFDERMLLHAEVEMKPHPHPERPDRLRAIAASLARAGIFPGRCCSIPAREITQEELMMVHSSEHIESVEVTSKLMSSYFTSDTYANEHSACAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGAKKVLILDWDVHHGNGTQEIFEQNNSVLYISLHRHEGGAFYPGTGGAHEVGYMGAEGFCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVILEGGYNLRSISSSATAVIKVLLGDSHVCELENSFPSKSGLQTVFEVLDIQNNFWPSLKPIFMNVMSLWKMYCLGKKSKPTKKRRRVIPPMWWRWGRRSFLFHMLNGHLRVKSK* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3740 564 SUPERFAMILY Arginase/deacetylase 159 506 IPR023696 -
Tpr4g3740 564 ProSitePatterns Zinc finger RanBP2-type signature. 95 114 IPR001876 -
Tpr4g3740 564 PANTHER HISTONE DEACETYLASE-RELATED 35 563 - -
Tpr4g3740 564 Pfam Histone deacetylase domain 183 471 IPR023801 -
Tpr4g3740 564 Gene3D Histone deacetylase domain 155 522 IPR037138 -
Tpr4g3740 564 PANTHER HISTONE DEACETYLASE 35 563 - -
Tpr4g3740 564 PRINTS Histone deacetylase superfamily signature 285 308 IPR000286 -
Tpr4g3740 564 PRINTS Histone deacetylase superfamily signature 318 333 IPR000286 -
Tpr4g3740 564 PRINTS Histone deacetylase superfamily signature 406 416 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3740 Tpr-Chr4 43313517 43320847 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3740 - - mtr:MTR_4g111985 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3740 4 43313517 43320847 Tpr4g3740 4 43313517 43320847 ECH