Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3735 ATGGTGGCCACTGGTGCTACTTCATTTTTTCCTGTTACTTCATCCTTGCCAGACTCTGCTGGCAACAAACTTGGTAGTGGGAATACGAACCTTGGTGGGCTTAAATCTAAACACGCGTCTTCTGGTGGTTTGCAAGTAAAGGCAAATGCCCATGCCCCTCCAAAGATTAATGGAACCAAGGTTTCTACATCTGTAGAACACTTTAAGCATGAGGATGTTTTGCCTTCGTCACAATCCTCTAGGACTTTTATCAACCAGTTACCTGACTGGAGCATGCTTCTTGCTGCCATCACGACAATTTTCTTGGCAGCAGAAAAGCAGTGGATGATGCTTGATTGGAAGCCAAGGCGGTCTGACATGCTTATTGACCCCTTTGGTATAGGCAAAATTGTGCAGGATGGTCTTGTGTTCAGTGAAAACTTTCCTATTAGGTCGTATGAAATTGGTGCAGATCGAACGGCGTCTATAGACACAATAATGAATCATTTGCAGGAAACTGCACTTAATCATGTTAAGATTGTGGGGCTTCTTGGTGACGGCTTTGGTTCTACGCCTGAAATGTGCAAAAAGAACTTGATATGGGTAGTTGCAAGGATGCAAGTTGTCGTTGATCGTTATCCTACGTGGGGAGATGTTGTTCATGTAGAAACTTGGGTTTCTGCTTCGGGCAAGAATGGTATGCGTCGTGATTGGCTTTTACGCGACTATAATACTGGTGAAATCTTGACGAGAGCCTCTAGTGTTTGGGTCATGATGAATAAACATACTAGAAAGCTGTCCAAAATTCCGGAAGAAGTCAGAGAGGAGATAGGATCTTATTTTGTGGAATCTGCTCCAATTCTGGAAGAGGATGACAGAAAACTAACTAAACTTGATGACAGTACAGCGGATTATATTCGCTCGGGTTTAAGTCCTAGATGGAGTGACCTAGATGTCAACCAGCATGTTAACAATGTGAAGTACATTGGCTGGATTCTGGAGAGTGCTCCACAGTCAATCTTGGAGAGTCATGAGCTTTGTGCTATGACTTTGGAGTATAGGAGGGAGTGTGGCAAGGACAGTGTGCTCAAGTCCCTGACTGCTGTATCTGATGCCAATGCCGGCAATCCAGCTCAAAGTGGACACATTGAGTGCAAGCATATGCTTCAACTTGAAGATGGTGCTGAAATTGTGAGGGGTAGGACTAAGTGGAGGCCCAAACCTGTGAACAACTTTGATATCGTGAATCTGGTTCCAGCAGGAAGCAACTAA 1251 0.4436 MVATGATSFFPVTSSLPDSAGNKLGSGNTNLGGLKSKHASSGGLQVKANAHAPPKINGTKVSTSVEHFKHEDVLPSSQSSRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGKIVQDGLVFSENFPIRSYEIGADRTASIDTIMNHLQETALNHVKIVGLLGDGFGSTPEMCKKNLIWVVARMQVVVDRYPTWGDVVHVETWVSASGKNGMRRDWLLRDYNTGEILTRASSVWVMMNKHTRKLSKIPEEVREEIGSYFVESAPILEEDDRKLTKLDDSTADYIRSGLSPRWSDLDVNQHVNNVKYIGWILESAPQSILESHELCAMTLEYRRECGKDSVLKSLTAVSDANAGNPAQSGHIECKHMLQLEDGAEIVRGRTKWRPKPVNNFDIVNLVPAGSN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3735 416 CDD 4HBT 137 253 - -
Tpr4g3735 416 Pfam Acyl-ATP thioesterase 1 123 IPR021113 GO:0016790
Tpr4g3735 416 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 298 402 IPR029069 -
Tpr4g3735 416 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 402 - -
Tpr4g3735 416 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 131 283 IPR029069 -
Tpr4g3735 416 Pfam Acyl-ACP thioesterase 134 398 IPR002864 GO:0006633|GO:0016790
Tpr4g3735 416 MobiDBLite consensus disorder prediction 21 36 - -
Tpr4g3735 416 Gene3D Hotdog Thioesterase 127 404 - -
Tpr4g3735 416 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 402 IPR045023 GO:0006633|GO:0016297
Tpr4g3735 416 MobiDBLite consensus disorder prediction 21 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3735 Tpr-Chr4 43254843 43259805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3735 1 400 Acyl Lipid Metabolism Gene Families AT1G08510 73.580 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3735 K10781 - gmx:100170693 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3735 4 43254843 43259805 Tpr4g3735 4 43254843 43259805 ECH