Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3560 ATGGAGTCTTTTCACAAATTCAGAATCTTGGTCTTGGTTTTCTGTTTGGCATTTTTTCAAACAGGTTATGGGTTTTACCTTCCAGGTAGTTACCCTCACAATTATGGTATTGGTGATGAATTGTCTGTGAAGGTGAATTCAATTACTTCAATTGATACTGAAATGCCATTTAGTTATTATAGTTTACCATTTTGTAAGCCTCAAGGTGGTGTTAAGGATAGTGCTGAGAATCTAGGTGAACTCCTTATGGGGGATCGGATCGAGAATTCGCCTTATAGGTTTAAGATGTACACCAATGAGACTGAGGTTTTTCTGTGTCAAGTTGATAAGTTGTCTGGTGATCAGTTCAAGATCTTGACGGAGAGGATTGATGAGATGTATCAAGTTAATCTAATACTTGATAATTTACCTGCTATTCGTTTTACGAAGAAAGATGAGTACTTTTTACGGTGGACTGGGTACCCTGTTGGTATTAAGATTGAGGGTGTGTATTATTTGTTTAACCATCTTAGGTTTAATGTTCTTGTCCATAAATATGAGGAGACCAATGTGGCTCGAGTTATGGGAACCGGTGATGCGGCTGAGATGATCCCTCCTGTTGGTAAGGAGGGATCTGACAAGCCGGGGTACATGGTTGTTGGGTTTGAGGTTATACCTTGTAGTATTATGCACAATGCTAATTCGGTTAAAAACTTGAAAATGTATGAAAAGTACCCGTCGCCTATCAAATGTGATCCATCAACTGTGGCAATGCCTATCAAAGAAGGCCAGCCCATTGCATTTTCCTATGAGGTAACCTTTGAGGAGAGTGATATCAAGTGGCCATCAAGATGGGATGCTTATTTGAAGATGGAGGGAGCCAAAGTCCATTGGTTCTCGATCCTCAATTCGTTAATGGTGATCACTTTCCTTGCTGGTATTGTTCTTGTTATCTTCCTGAGAACTGTTAGGAGGGATCTGGCCAGTTACGAGGAGCTTGATAAGGAAGCTCAAGCACAGATGAATGAGGAGTTATCTGGTTGGAAGCTTGTTGTGGGGGATGTTTTCCGCGCTCCATCGAACCCTGCTTTGTTGTGTATAATGGTTGGTGATGGAGTTCAGATTCTAGGGATGGCTATTGTCACAATATTGTTTGCTGCACTTGGATTCATGTCACCAGCTTCTCGCGGAACACTCATCACAGGTATGCTGTTTTTCTACCTGGTACTTGGTATTGCTGCTGGTTATGTTGCAGTTCGACTATGGAGAACACTCGGGAACGGAGATCAGAAAGGTTGGATTTCAGTTGCATGGAAAGCTGCTTGTTTCTTCCCTGGTATTGCCTTTTCTATCCTCACAATCTTAAACTTCCTATTATGGGGAAGCCACAGTACAGGAGCCATTCCATTTTCACTCTTCGTTATATTGCTTTTGCTTTGGTTCTGCATTTCTGTGCCACTTACACTTGTTGGTGGCTACTTTGGAGCAAAAGCACCTCACCTTGAGTATCCTGTTAGAACCAACCAAATTCCTCGAGAAATTCCACAGCAGCGGTATCCGTCATGGCTTTTAGTTCTAGGTGCTGGCACCCTTCCATTTGGTACCCTTTTCATCGAGCTCTTCTTTATCATGTCCAGCATTTGGATGGGTCGCGTTTACTACGTTTTTGGGTTTCTCTTCATTGTTTTGATTCTTCTCGTCGTGGTTTGTGCCGAAGTATCTCTAGTTCTAACTTACATGCATCTCTGCGTGGAGGATTGGAGATGGTGGTGGAAATCATTCTTTGCTTCCGGTTCTGTTGCATTGTACATCTTTTTGTATTCCATAAACTATCTTGTATTTGATCTCAAGAATTTGAGTGGACCTGTTTCTGCAACTCTTTACTTGGGATATTCACTCTTCATGGTACTAGCAATCATGTTGGTGACCGGCACAGTTGGGTTCCTCTCTTCATTCTGGTTCGTGTATTACTTGTTCTCTTCTGTGAAGTTGGATTGA 1977 0.4198 MESFHKFRILVLVFCLAFFQTGYGFYLPGSYPHNYGIGDELSVKVNSITSIDTEMPFSYYSLPFCKPQGGVKDSAENLGELLMGDRIENSPYRFKMYTNETEVFLCQVDKLSGDQFKILTERIDEMYQVNLILDNLPAIRFTKKDEYFLRWTGYPVGIKIEGVYYLFNHLRFNVLVHKYEETNVARVMGTGDAAEMIPPVGKEGSDKPGYMVVGFEVIPCSIMHNANSVKNLKMYEKYPSPIKCDPSTVAMPIKEGQPIAFSYEVTFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLASYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPALLCIMVGDGVQILGMAIVTILFAALGFMSPASRGTLITGMLFFYLVLGIAAGYVAVRLWRTLGNGDQKGWISVAWKAACFFPGIAFSILTILNFLLWGSHSTGAIPFSLFVILLLLWFCISVPLTLVGGYFGAKAPHLEYPVRTNQIPREIPQQRYPSWLLVLGAGTLPFGTLFIELFFIMSSIWMGRVYYVFGFLFIVLILLVVVCAEVSLVLTYMHLCVEDWRWWWKSFFASGSVALYIFLYSINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLVTGTVGFLSSFWFVYYLFSSVKLD* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3560 658 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 12 658 IPR004240 GO:0016021
Tpr4g3560 658 Pfam Endomembrane protein 70 56 610 IPR004240 GO:0016021
Tpr4g3560 658 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 12 658 - -
Tpr4g3560 658 Coils Coil 313 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3560 Tpr-Chr4 41442960 41445773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3560 1 658 Miscellaneous Gene Families AT5G35160 83.763 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3560 K17086 - gmx:100802084 1244.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3560 4 41442960 41445773 Tpr4g3560 4 41442960 41445773 ECH
Tpr4g3560 4 41442960 41445773 Tpr5g0510 5 7594260 7598011 PCT