Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3278 ATGGGTGTCCTTGGAGCAATAATAAGGCATTTGGACACAACAATAGGGCCCGGAATAATGCTTCTTTATCCTTTATACGCATCAATGAGGGCAATTGAAAGTCCTTCAACTTTAGATGACCAACAGTGGCTAACTTATTGGGTTTTATACTCTTTCATAACACTCTTTGAGCTTTCAACTTATAGGATCCTATATTGGATTCCCATTTGGCCATACATGAAGCTTGTGTTCTGCATATGGTTGGTACTGCCAATGTTCAATGGAGCAGCTTACATATATGAAAATTATGCGAGGAAATACTTCAAGAAATTTGGTAACTATGGAGGAGGATCCAATTATCCTGAGGAGTACAAAAAGATCCTTCATATGATGACTTTCGACGCAAGAAAAGCAGTTGAACGTTATATCGATAGATTTGGACCAGATGCATTCGAGAGAGTGATTAGAGCAGCTGAGAAAGAAGCAAAGAAGCATTGA 477 0.3878 MGVLGAIIRHLDTTIGPGIMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSTYRILYWIPIWPYMKLVFCIWLVLPMFNGAAYIYENYARKYFKKFGNYGGGSNYPEEYKKILHMMTFDARKAVERYIDRFGPDAFERVIRAAEKEAKKH* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3278 158 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Tpr4g3278 158 PANTHER HVA22-LIKE PROTEIN 4 109 IPR031117 GO:0009737
Tpr4g3278 158 PANTHER HVA22-LIKE PROTEINS 4 109 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3278 Tpr-Chr4 38789276 38790622 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3278 K17279 - gmx:100779435 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3278 4 38789276 38790622 Tpr4g3278 4 38789276 38790622 ECH
Tpr3g3356 3 37011541 37013678 Tpr4g3278 4 38789276 38790622 PCT