Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2563 ATGTGCAATCCAAAGCCATCTTCACCAACATCACCATTTCTTTCTCCAACAAAAACTCACCTCATAAATCCTCATACCAAATCTGTTTATTCCAATCCTACCCTTGATGATGATCTTGTTCAAGATGAACTTCAAAGATGGCCTACTCTTAAAGAGGCCTTAACAGAAATCAAAGAAATAGGAAAAATATCTGGTCCAACAACAATAACAGGTTTATTGCTATATTCAAGAGCTATGATCTCAATGATTTTTCTTGGATACCTTGGTGAGATGGAACTAGCAGGAGGTTCACTTTCAATAGGTTTTGCAAACATCACTGGTTACTCAGTGATATCAGGATTAGCCATGGGAATGGAACCAATTTGTGGACAAGCTTATGGAGCAAAACAATGGAAAATACTTGGATTAACACTTCAAAGAACAGTTCTTCTTCTTCTTTCAACTTCAATCCCTATCTCATTCATTTGGTTCAACATGAAAAGAATCCTTTTGTTTTCAGGTCAAGACCAAGAAATTTCATCAATGGCACAAACTTTTATACTTTTTTCAATACCTGATCTTTTTCTACTATCAATTCTTCATCCTTTGAGAATCTATTTAAGGACTCAAGGAATAACATTGCCATTAACATATTGTTCAGCTGTTTCTGTTTTGCTTCATGTACCTCTTAATTTTCTTTTAGTGGTTCATTTTCAAATGGGAATTGCAGGGGTGTCAATAGCAATGGTTTTGACTAATTTAAACCTTGTTATTTTACTTTCATCTTTTTTGTACTTCTCTAGAGTTTATAAAGACTCTTGGATTTCACCAAGCTTAGAATGCATTAAAGGGTGGTCATCATTGCTTTCGCTCGCTATTCCAACTTGTGTTTCGGTTTGTCTGGAATGGTGGTGGTATGAGTTCATGATAATGATGTGTGGACTTTTGGTTAATCCTAAAGCAACTATTGCTTCAATGGGAATTCTCATTCAAACAACATCTTTGGTTTATGTTTTTCCATCATCACTTAGTCTTGGTGTTTCAACTAGAATAGGGAATGAGTTAGGTGCAAATAGGCCACAAAAAGCAAGAATTTCAATGATAGTTTCACTATTTTGTGCAATAATTTTAGGACTTGGAGCTATGCTATTTACAACATTGATGAGAAACCAATGGGGGAAATTCTTCACAAATGACAAAGAAATTCTTGAACTAACATCTATTGTGTTACCAATTGTTGGACTCTGTGAGCTCGGAAATTGTCCGCAAACAACAGGTTGTGGTGTTCTTAGAGGAAGTGCAAGACCAACAATCGGCGCTAACATAAATTTGGGGTCATTTTACCTTGTTGGTATGCCGGTTGCAATCTTTTTAGGATTTGTTGCTAAATTTGGGTTTGCAGGGTTATGGATTGGGTTACTTGCAGCTCAAGGCTCATGTGCTATGCTTATGTTAGTTGTTCTTTGTAGAACTGATTGGAATTTGCAAGTTCAAAGAGCTAAAGAACTCACAAAAGATTCAACAATAACTACTACTTGTGATGATGATGTTGATGCTAAATTACCTACATTTATGGAAGGTAATAATAATATGAACAAGAATAAGGTTCATGGTTGTCTTGAAGAAATTGTGATCACTCATGATGAAAAAGATCCACTTATCATAACAACTACTACCACCAAATCCAATTACATTGAAGATTAG 1683 0.3535 MCNPKPSSPTSPFLSPTKTHLINPHTKSVYSNPTLDDDLVQDELQRWPTLKEALTEIKEIGKISGPTTITGLLLYSRAMISMIFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFIWFNMKRILLFSGQDQEISSMAQTFILFSIPDLFLLSILHPLRIYLRTQGITLPLTYCSAVSVLLHVPLNFLLVVHFQMGIAGVSIAMVLTNLNLVILLSSFLYFSRVYKDSWISPSLECIKGWSSLLSLAIPTCVSVCLEWWWYEFMIMMCGLLVNPKATIASMGILIQTTSLVYVFPSSLSLGVSTRIGNELGANRPQKARISMIVSLFCAIILGLGAMLFTTLMRNQWGKFFTNDKEILELTSIVLPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYLVGMPVAIFLGFVAKFGFAGLWIGLLAAQGSCAMLMLVVLCRTDWNLQVQRAKELTKDSTITTTCDDDVDAKLPTFMEGNNNMNKNKVHGCLEEIVITHDEKDPLIITTTTTKSNYIED* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2563 560 PANTHER PROTEIN DETOXIFICATION 35 510 - -
Tpr4g2563 560 TIGRFAM matE: MATE efflux family protein 78 463 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr4g2563 560 Pfam MatE 66 226 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr4g2563 560 Pfam MatE 287 449 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Tpr4g2563 560 CDD MATE_eukaryotic 56 492 IPR045069 GO:0042910|GO:1990961
Tpr4g2563 560 PANTHER MULTIDRUG RESISTANCE PROTEIN 35 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2563 Tpr-Chr4 28061562 28063967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2563 K03327 - qsu:111988266 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2563 4 28061562 28063967 Tpr4g2563 4 28061562 28063967 ECH