Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2557 ATGGATACTACAGCAGGTCCAAGTCTCTATCCATTGCACCATAGCAAAACTATTCACCTGGTTAGGCATGCCCAAGGAGTTCATAATGTGGAAGGAGAGAAGAACCATGATGCTTACTTATCGGACGATCTATTTGATGCAAACCTTACCCCTCTTGGCTGGAAGCAGGTTGAAAATCTGCAAAAGCACGTGAAGGCTATTGGACTTTCTGGAAAAATTGAACTAGTTGTGGTTTCTCCATTGTTAAGGACAATGCAAACAGCAGTTGGAGTCTTTGGTGGGGAAGCACATACTGATGGAACTAATGAACCTCCTTTGATGATTGAAAATGTGGGACATAGTGATCATCCTGCAGTTTCTAGTCTTAACTGCCCACCTTTTGTTGCAGTAGAGCTTTGCCGAGAGCAAATGGGTCTCCATCCTTGTGATAAGAGAAGAACTGTCACTGAGTACCGACACTTGTTTCCAGGAATTGATTTTTCATTGGTCGAAACTGATGAGGACACTTGGTACACACCTGAAAGAGAGAAGAAAGAAGAAGTTACTGCTAGGGGACTGAAGTTTTTGGAATGGTTGTGTACACGTAAAGAGAAGGAGATAGCTGTTGTTACACACAGCAGTTTTCTGTTTAATACTCTAAGTGCTTTTGGAAATGATTGTCACCCAAATATTAAGACTGAATTGTCTGCACACTTTGCTAATTGTGAACTACGTTCGATGGTTATCATGGATAAAGGTATGGTTGGATCAAATAGTTCAACTACCAACTATCCTGGCAAAATTCCTCACGGTCCGGATCTTCCTAGTGATGCTACTGACTAA 822 0.4173 MDTTAGPSLYPLHHSKTIHLVRHAQGVHNVEGEKNHDAYLSDDLFDANLTPLGWKQVENLQKHVKAIGLSGKIELVVVSPLLRTMQTAVGVFGGEAHTDGTNEPPLMIENVGHSDHPAVSSLNCPPFVAVELCREQMGLHPCDKRRTVTEYRHLFPGIDFSLVETDEDTWYTPEREKKEEVTARGLKFLEWLCTRKEKEIAVVTHSSFLFNTLSAFGNDCHPNIKTELSAHFANCELRSMVIMDKGMVGSNSSTTNYPGKIPHGPDLPSDATD* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2557 273 CDD HP_PGM_like 17 88 IPR013078 -
Tpr4g2557 273 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 1 273 - -
Tpr4g2557 273 Gene3D - 16 258 IPR029033 -
Tpr4g2557 273 SUPERFAMILY Phosphoglycerate mutase-like 16 249 IPR029033 -
Tpr4g2557 273 Pfam Histidine phosphatase superfamily (branch 1) 18 90 IPR013078 -
Tpr4g2557 273 SMART PGAM_5 17 212 IPR013078 -
Tpr4g2557 273 MobiDBLite consensus disorder prediction 253 273 - -
Tpr4g2557 273 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 1 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2557 Tpr-Chr4 27910024 27917420 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2557 - - mtr:MTR_5g067240 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2557 4 27910024 27917420 Tpr4g2557 4 27910024 27917420 ECH