Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g2549 ATGGAAGCTGCGTTGGATCAAGCTACTAGTACATGTTCTCACTGTGATCGAGCTATCCCTATTGCAAATGTTGACTTGCATAATGCTCATTGCTCAAGGAACCTTCAAAAATGCAAAGTTTGTGGTGATATGGTTCCTAAAAAAAATGCTGAGGATCATTATTTAACCACTCATGCGCCGGTTTCCTGTTCATTGTGCAGTGAGACAATAGATCGTGATATCATAGATATCCATAAAGGTGAAAATTGCCCTAAAAGGATTGTCACTTGTGACTTCTGTGAATTCCCATTGCCAGCTGTTGACCTAGCTGAGCATCAGGAAGTATGCGGGAATCGAACAGAACTGTGTCACCTTTGTAACAAATATGTTAGACTTCGTGAAAGATACACTCATGAAGCTAGGTGCAATGGGATTCAAGATAGCGCTGTTGGCTCTTCAAGGAATGTGAGGGAGGCTGAAAGAGACGAAGGTGTTCAACGAAGGCGGCCGCAGAACGAGTTCTCAACTAAACGTCTTCTTTTCTCGATAGCCATCACTGGTATTGCTGTTATACTTGGATCTATTTTCCTACAAAGGAAAGCAGATCCCAGTGAGATGCATTAG 603 0.4245 MEAALDQATSTCSHCDRAIPIANVDLHNAHCSRNLQKCKVCGDMVPKKNAEDHYLTTHAPVSCSLCSETIDRDIIDIHKGENCPKRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNKYVRLRERYTHEARCNGIQDSAVGSSRNVREAERDEGVQRRRPQNEFSTKRLLFSIAITGIAVILGSIFLQRKADPSEMH* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g2549 200 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 3 199 - -
Tpr4g2549 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Tpr4g2549 200 PANTHER XIAP-ASSOCIATED FACTOR 1-LIKE 3 199 - -
Tpr4g2549 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 57 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g2549 Tpr-Chr4 27781859 27786537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g2549 - - gmx:100811867 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g2549 4 27781859 27786537 Tpr4g2549 4 27781859 27786537 ECH